Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02963 and BL02936

See Amino acid alignment / Visit BSNT_02963 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:39
# Commandline: needle
#    -asequence dna-align/BSNT_02963___yneF.1.5803.seq
#    -bsequence dna-align/BL02936___yneF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02963___yneF-BL02936___yneF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02963___yneF-BL02936___yneF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02963___yneF
# 2: BL02936___yneF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity:     195/219 (89.0%)
# Similarity:   195/219 (89.0%)
# Gaps:           0/219 ( 0.0%)
# Score: 879.0
# 
#
#=======================================

BSNT_02963___      1 ATGACTTTATGGGTTGGCATCCTAGTGGGCGTTGTTGCATTGCTCATAGG     50
                     |||..|||.|||||||.||||||||||||||||.|.|||||||||..|||
BL02936___yne      1 ATGGATTTGTGGGTTGTCATCCTAGTGGGCGTTTTAGCATTGCTCGCAGG     50

BSNT_02963___     51 TGTTGCACTCGGGTTTTTTATTGCTCGTAAATATATGATGAGCTACCTGA    100
                     ||||||||||||.||||||||||||||||||||||||||||.|||..|||
BL02936___yne     51 TGTTGCACTCGGATTTTTTATTGCTCGTAAATATATGATGAACTATTTGA    100

BSNT_02963___    101 AAAAGAATCCGCCTATTAATGAACAAATGTTACGCATGATGATGATGCAA    150
                     ||||.||||||||.|||||||||||||||.|.|||||||||||||||||.
BL02936___yne    101 AAAAAAATCCGCCAATTAATGAACAAATGCTGCGCATGATGATGATGCAG    150

BSNT_02963___    151 ATGGGAATGAAACCTTCTCAAAAGAAAATCAATCAAATGATGAAAGCCAT    200
                     |||||.||||||||.||.||.||||||||.||||||||||||||||||||
BL02936___yne    151 ATGGGTATGAAACCATCCCAGAAGAAAATTAATCAAATGATGAAAGCCAT    200

BSNT_02963___    201 GAATAATCAAACGAAATAA    219
                     |.|.|||||||||||||||
BL02936___yne    201 GGAAAATCAAACGAAATAA    219


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