Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02984 and BL02945
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:40
# Commandline: needle
# -asequence dna-align/BSNT_02984.1.5803.seq
# -bsequence dna-align/BL02945___yneP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02984-BL02945___yneP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02984-BL02945___yneP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02984
# 2: BL02945___yneP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 425
# Identity: 317/425 (74.6%)
# Similarity: 317/425 (74.6%)
# Gaps: 16/425 ( 3.8%)
# Score: 1133.0
#
#
#=======================================
BSNT_02984 1 TTGCATGTATCAAAAAAAGAAATAGAAGTGCGTTATGCAGAAACAGATCA 50
|||.|.||.||||||||||||||||||||.||.|||||.||||||||.||
BL02945___yne 1 TTGTACGTCTCAAAAAAAGAAATAGAAGTCCGCTATGCCGAAACAGACCA 50
BSNT_02984 51 AATGGGGATTGTCTATCACGCAAATTATCTTG-TGTGGATGGAGGTCGGC 99
||||||..|.|||||||||||.|||||| ||| |.|||||||||||.|||
BL02945___yne 51 AATGGGTGTCGTCTATCACGCCAATTAT-TTGATTTGGATGGAGGTAGGC 99
BSNT_02984 100 AGAACGGCCTTGATTAAGGACTTAGGCTTTTTATATAGTGATATGGAAAA 149
.|.|||||.||.|||||.||..|.|||||||..|||...||.|||||.||
BL02945___yne 100 CGGACGGCTTTAATTAAAGAACTCGGCTTTTCTTATGCCGAAATGGAGAA 149
BSNT_02984 150 AAAAGGCATTCTGTCCCCAGTCGTTGATATCAATATTTCCTA--TAAAAA 197
|.|.|||||.|||||.||.|||||.|||||||||.|...||| |.|||
BL02945___yne 150 AGACGGCATCCTGTCGCCTGTCGTGGATATCAATGTCCGCTACGTCAAA- 198
BSNT_02984 198 GCCGCTTCATTACGGAGAAACCGCGGTTGTACATACATGGATAGAGGAAT 247
||.||||..|||||.|||||.|||...||||||||.|||||.||.||.|
BL02945___yne 199 -CCTCTTCGCTACGGTGAAACAGCGACGGTACATACGTGGATTGAAGATT 247
BSNT_02984 248 ATAACGGCTTTAAAACCGTCTATGGTTATCACATTTATAATCCGGCCGGT 297
|.||||||||||||||.||.|||||.|||.|.||||.||||.|.|||||.
BL02945___yne 248 ACAACGGCTTTAAAACGGTATATGGGTATGAAATTTTTAATTCCGCCGGA 297
BSNT_02984 298 GA----GCTTTCCATCAAAGCCACCTCATCTCATATTTGTGTGGATAAAG 343
|| ||| .|.||.|..||.||.||.||||||||.||.||....|
BL02945___yne 298 GAAACCGCT----GTGAAGGGAACATCGTCCCATATTTGCGTTGACGGGG 343
BSNT_02984 344 AAAGCTTTAAGCCAATTCAATTCCGCAAAGCTTT-TCCTGATTGGCACAC 392
|.|||||.||.||..||||.|||||| ||||||| |||..|.|||||...
BL02945___yne 344 ACAGCTTCAAACCGGTTCAGTTCCGC-AAGCTTTATCCAAAGTGGCATGA 392
BSNT_02984 393 ATCATATGAAAAGGCCAAAAAATAG 417
|.||||.|||.||||||||||.||.
BL02945___yne 393 AGCATACGAAGAGGCCAAAAAGTAA 417
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