Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06076 and BL02958

See Amino acid alignment / Visit BSNT_06076 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:05
# Commandline: needle
#    -asequence dna-align/BSNT_06076___yxeA.1.5803.seq
#    -bsequence dna-align/BL02958___yxeA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06076___yxeA-BL02958___yxeA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06076___yxeA-BL02958___yxeA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06076___yxeA
# 2: BL02958___yxeA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 369
# Identity:     240/369 (65.0%)
# Similarity:   240/369 (65.0%)
# Gaps:          45/369 (12.2%)
# Score: 697.0
# 
#
#=======================================

BSNT_06076___      1 ATGAAAAAAGCAATGGCAATCCTGGCCGNGGCT---GCTGCCGTAATATG     47
                     |||||||||.||||..|..||.|..|.| .|||   ||||      ||||
BL02958___yxe      1 ATGAAAAAAACAATTTCTCTCATTACAGCCGCTTTAGCTG------TATG     44

BSNT_06076___     48 ---CGG-GC--TTCTCTTTTTTCATAACGATGTTACAGACAGATTTAATC     91
                        ||| ||  ||||.||..|||||||.||.||.||||||||.||.||||
BL02958___yxe     45 TATCGGCGCATTTCTGTTGATTCATAATGAAGTGACAGACAGGTTCAATC     94

BSNT_06076___     92 CGTTTATTCACCAGCAAGA---TGTCTATGTTCAGATTGATCGAGATGGC    138
                     |..||.|   ..||.||||   .||.|||||.|||||..|...|||.||.
BL02958___yxe     95 CACTTGT---GAAGAAAGAAAGCGTATATGTCCAGATCAACAAAGACGGT    141

BSNT_06076___    139 AGACATCTTAGTCCGGG-CGGTACTGAATATACATTAGACGGATATAATG    187
                     |..||.||.||.||||| ||.|| |||.||.||..|.||.||||||||||
BL02958___yxe    142 AAGCACCTGAGCCCGGGCCGCTA-TGAGTACACGCTGGAAGGATATAATG    190

BSNT_06076___    188 -CATCCGGGAAAAAAGAAGAAGTGACCTTTTTCGCCGGCAAAGAGCTTCG    236
                      || ||||.||..||.|||||.|.||.||.|.||||.||.|....|||| 
BL02958___yxe    191 ACA-CCGGTAAGGAAAAAGAAATTACATTCTCCGCCAGCGATTCCCTTC-    238

BSNT_06076___    237 GAAG-AACGCGTATTTGAAGGTGAAGGCGAAAGGAAAGTATGTCGAGACT    285
                     |||| |||||.|||.|.|||||.||.|||||.|||||.|||||.|||||.
BL02958___yxe    239 GAAGAAACGCCTATCTAAAGGTAAACGCGAAGGGAAAATATGTTGAGACA    288

BSNT_06076___    286 TGGGAAGAAGTCAAGTTTGAAGATATGCCGGACT-CCGTACAGTCAAAAT    334
                     |||||||||||..||...|..|..||||| ||.| ||||.|||..|||||
BL02958___yxe    289 TGGGAAGAAGTACAGCCCGGCGGCATGCC-GAGTGCCGTTCAGAAAAAAT    337

BSNT_06076___    335 TAAAGTGA-----------    342
                          |||           
BL02958___yxe    338 -----TGATCAAGCAATAA    351


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