Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02453 and BL02968

See Amino acid alignment / Visit BSNT_02453 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence dna-align/BSNT_02453.1.5803.seq
#    -bsequence dna-align/BL02968___ylaC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02453-BL02968___ylaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02453-BL02968___ylaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02453
# 2: BL02968___ylaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 569
# Identity:     197/569 (34.6%)
# Similarity:   197/569 (34.6%)
# Gaps:         310/569 (54.5%)
# Score: 468.0
# 
#
#=======================================

BSNT_02453         0 --------------------------------------------------      0
                                                                       
BL02968___yla      1 ATGGCTCACAATAATAAACAGACGATTGAAGAACTGTACAGGGAATATTA     50

BSNT_02453         0 --------------------------------------------------      0
                                                                       
BL02968___yla     51 TCATGACATCATGTACTATTTGTACAGGCGAACCCATCAGCTTGAGACGG    100

BSNT_02453         0 --------------------------------------------------      0
                                                                       
BL02968___yla    101 CGAAAGACCTGGCGCAGGATACGTTTCTAAAAGCTTTTGCGGGCCTGGAG    150

BSNT_02453         0 --------------------------------------------------      0
                                                                       
BL02968___yla    151 TCTTTCAGGGGCCATTCCTCGATCAAAACATGGCTGTATACGATCGCACA    200

BSNT_02453         1 ---------------TTGGTACCGAAGGGATGTCAATA-CCAATTTACTG     34
                                    .||||||.|||..|||...||.| |||||||.|.|
BL02968___yla    201 TCATACGTTTATCAACTGGTACAGAAAAGATAAAAAAATCCAATTTTCCG    250

BSNT_02453        35 AAAT---------CAGCAAAAATGA-AGGGTTAAC-GCAAACAACTTATG     73
                     |..|         |.||      || |.||  ||| |||.|||   |.||
BL02968___yla    251 ACGTGGCGGCCTGCGGC------GATATGG--AACAGCACACA---TTTG    289

BSNT_02453        74 ACCAGCCTGAACAGTATCTGTCACGGACG----------GTGAAAAGC-G    112
                     |...||||||.|...||.||.||  .|||          | |||.||| |
BL02968___yla    290 AAATGCCTGAGCGCCATTTGGCA--AACGCCATAATGCAG-GAAGAGCTG    336

BSNT_02453       113 AA-----ACACTG--CGGCAGGAGCTCCTGAAGTTAAAAGATCAGCA-TC    154
                     ||     |||.||  |||         |||||   |.|||||.|.|| .|
BL02968___yla    337 AAACATCACATTGACCGG---------CTGAA---AGAAGATTACCAGAC    374

BSNT_02453       155 AATCCGTTTTGATTTTAAGAGAATTCCAAGAGCTTTCTTATGAAGAAATC    204
                     ..|||    |.|||||||||||.||.||||||||.||.||.||.|||||.
BL02968___yla    375 TGTCC----TCATTTTAAGAGAGTTTCAAGAGCTGTCATACGAGGAAATA    420

BSNT_02453       205 GCTGAGATATTAG----GA--TGGAGTCTTTCTAAGGTGAAAACCACAT-    247
                     ||.||      ||    ||  ||||..||.||.|||||.||||||| || 
BL02968___yla    421 GCGGA------AGTGCTGAATTGGAAACTGTCAAAGGTAAAAACCA-ATC    463

BSNT_02453       248 TGCACCGGGCTAGATTAGAGCTAAAGAAAAACATGACGAAAAGTAGAGAG    297
                     |.||||||||..|..|.|||||.||.||||.|.|   |.||.|.||.|||
BL02968___yla    464 TTCACCGGGCCCGCCTGGAGCTGAAAAAAAGCTT---GGAAGGCAGGGAG    510

BSNT_02453       298 G----AGGAGCGGATATGA    312
                     |    |             
BL02968___yla    511 GTTTAA-------------    516


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