Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02459 and BL02971

See Amino acid alignment / Visit BSNT_02459 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:01
# Commandline: needle
#    -asequence dna-align/BSNT_02459___ylaH.1.5803.seq
#    -bsequence dna-align/BL02971___ylaH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02459___ylaH-BL02971___ylaH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02459___ylaH-BL02971___ylaH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02459___ylaH
# 2: BL02971___ylaH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity:     226/327 (69.1%)
# Similarity:   226/327 (69.1%)
# Gaps:          15/327 ( 4.6%)
# Score: 750.0
# 
#
#=======================================

BSNT_02459___      1 TTGAATGACGTAAGCGAACGCCTGTCGTTCTTCGCCGCTCTATATCAAGT     50
                     ||||.|||.|||||.|||||.||||||||.||.||||||||.|||.||||
BL02971___yla      1 TTGACTGATGTAAGTGAACGGCTGTCGTTTTTTGCCGCTCTCTATAAAGT     50

BSNT_02459___     51 AGACCGGCAGCCTGCGGCAGGCATGTGGCTGCTGTACGGCACGATTTTTG    100
                     .||||.|.|.||.|.|||.||.||||||..|||.||.|.|||.||.||.|
BL02971___yla     51 GGACCAGAATCCCGAGGCGGGAATGTGGTGGCTTTATGCCACCATCTTCG    100

BSNT_02459___    101 TGTTGGCCGTTATTGTATTTAAGCTTGGATTTGCTAAACGGCTTCCTGTA    150
                     |..||.|.|...|.||.|||||.||.||.||.||.||||||||.||..|.
BL02971___yla    101 TCCTGTCTGCGGTCGTCTTTAAACTGGGTTTCGCCAAACGGCTGCCGCTG    150

BSNT_02459___    151 TTAAAATCTGCAGTGGTGTATGTATTTTTGGCTTTGGGCTGCACTGTTTT    200
                     ||.|||.|.||..|..|.||..|.|||.||||.||.|||||.||..||||
BL02971___yla    151 TTGAAAACGGCGATCATTTACTTTTTTCTGGCATTAGGCTGTACGTTTTT    200

BSNT_02459___    201 GACTTTTTTAGGGGTGTTTTTGCCCGTGGCAGAAGGATTGGTCGTCGCTG    250
                     .||||||||.||.||.|||.||||.||.|.||||||..||.||||.||||
BL02971___yla    201 AACTTTTTTCGGCGTTTTTCTGCCGGTTGGAGAAGGGCTGATCGTAGCTG    250

BSNT_02459___    251 CGCTGATTTTAATC------ATTTACAAAATCCGGCTGTATCAGTCGAAA    294
                           ||||||||      |||||.||||||||.|||.|.|..||||||
BL02971___yla    251 ------TTTTAATCCTTTCGATTTATAAAATCCGCCTGCACCGTTCGAAA    294

BSNT_02459___    295 AAAGGACAGTC---TGCAAAATCATAA    318
                     ||||..|||.|   .||.||..|.||.
BL02971___yla    295 AAAGAGCAGACGGGGGCGAATACGTAG    321


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