Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02463 and BL02972

See Amino acid alignment / Visit BSNT_02463 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:01
# Commandline: needle
#    -asequence dna-align/BSNT_02463___ylaK.1.5803.seq
#    -bsequence dna-align/BL02972___ylaK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02463___ylaK-BL02972___ylaK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02463___ylaK-BL02972___ylaK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02463___ylaK
# 2: BL02972___ylaK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1354
# Identity:    1007/1354 (74.4%)
# Similarity:  1007/1354 (74.4%)
# Gaps:          50/1354 ( 3.7%)
# Score: 3641.5
# 
#
#=======================================

BSNT_02463___      1 TTGAGTAAAATTTATGTGTTAGATACGAATGTGTTATTACAGGATCCTAA     50
                     ||||||||||||||||||.|||||||||||||||||||.||||||||.||
BL02972___yla      1 TTGAGTAAAATTTATGTGCTAGATACGAATGTGTTATTGCAGGATCCGAA     50

BSNT_02463___     51 CGCGATATTTTCTTTTGAAGAAAATGAGGTTGTCATCCCTGCTGTCGTTT    100
                     ..|.||.||||||||||||||.||.|||||.||||||||.||||||||.|
BL02972___yla     51 TTCAATCTTTTCTTTTGAAGATAACGAGGTCGTCATCCCGGCTGTCGTAT    100

BSNT_02463___    101 TAGAAGAGGTTGATTCAAAAAAACGGTATATGGACGAAGTTGGGAGGAAT    150
                     |.||.||.||.||||||||.|||||.||.|||||.|||.|||||||||||
BL02972___yla    101 TGGAGGAAGTCGATTCAAAGAAACGTTACATGGATGAAATTGGGAGGAAT    150

BSNT_02463___    151 GCAAGGCACGTATCTAAGCTAATCGA-----TGCGCTAAGACAAAAGGGC    195
                     |||||||.|||||||||..|.||.||     ||||.|     .|||.||.
BL02972___yla    151 GCAAGGCGCGTATCTAAATTGATAGATGATTTGCGTT-----TAAAAGGA    195

BSNT_02463___    196 AGGCTGCATGAGCATGTACCGCTTGACACCGGCGGCACACTGAGAATTGA    245
                     |.||||.||||..||||.||.||....|.|||.||.|...|||||||.||
BL02972___yla    196 AAGCTGTATGAAAATGTTCCTCTCCCTAACGGAGGAAGCTTGAGAATCGA    245

BSNT_02463___    246 ACTGAATCATCGTTCGTTTCACCAGCTGCAAGAGATCTTTATTGAAAAGA    295
                     .||.||.|||||.||.|||||.|||||.||.||.||||||||.|||||.|
BL02972___yla    246 GCTTAACCATCGCTCTTTTCAGCAGCTTCAGGAAATCTTTATCGAAAAAA    295

BSNT_02463___    296 CGAACGATAATCGCATATTAGCCGTTGCGAAAAACTTGAGCCTAGAGGAA    345
                     |.|.|||.||.||.||.||||||||.|||||||||.|.|||||.||.|||
BL02972___yla    296 CTAGCGACAACCGGATTTTAGCCGTAGCGAAAAACCTCAGCCTTGAAGAA    345

BSNT_02463___    346 GAAACCAAGGAAAATGGCAGGCCGGTTATCCTCGTCAGTAAGGATGTACT    395
                     |||||.||.|||...|||||.||||||||.||.|||||.||.|||.|.||
BL02972___yla    346 GAAACGAAAGAAGGCGGCAGACCGGTTATTCTTGTCAGCAAAGATATGCT    395

BSNT_02463___    396 GGTCAGGGTTAAAGCCGACGCAATCGGACTGCTTGCTGAAGATTTCTTGA    445
                     |.||.|.||.||||||||.||.|||||..||.|..|.||.|||||.|||.
BL02972___yla    396 GATCCGCGTCAAAGCCGATGCCATCGGGTTGATGTCAGAGGATTTTTTGC    445

BSNT_02463___    446 ATGACCGGGTTGTGGACAATGATGAAATGTACAGCGGCTATAAAGATTTA    495
                     |.|||.|||||||.|||||||||||.||.||||||||.||||..||..|.
BL02972___yla    446 ACGACAGGGTTGTCGACAATGATGATATATACAGCGGTTATACGGACGTG    495

BSNT_02463___    496 TATATCAGC---CAGCAGCTG--TTCAGCTCTTTTTACGGGAAAAATCA-    539
                     ||.||..||   .|.|||.||  ||||    |||||    ..||.|||| 
BL02972___yla    496 TACATTCGCTCGGATCAGATGAATTCA----TTTTT----TGAACATCAT    537

BSNT_02463___    540 -AATTTCAG-TAAACGATGTGAAACAGC----ATGCGTTTTATCCGAATC    583
                      |.||.||| |..||||    ||.||||    |..||.|.|.||||||.|
BL02972___yla    538 TATTTGCAGCTTGACGA----AATCAGCGAGGAGCCGCTGTGTCCGAACC    583

BSNT_02463___    584 AGTTTGCTTTAATGAAGGATGAGCTAGGAGGGTCCTCCTCGGCAGTCGGA    633
                     ||||||...|.||||||||.|.|||.||.||.||.||.||.||.||.|||
BL02972___yla    584 AGTTTGTCGTCATGAAGGACGCGCTCGGCGGATCATCTTCTGCGGTTGGA    633

BSNT_02463___    634 ATTGCAGACAAAACCGGAA----CGGTATTAAAAAGACTCGTATTTGATG    679
                     ||.|.|||..|||.|||||    ||   |||||||| ||.||.|||||..
BL02972___yla    634 ATCGTAGATCAAAGCGGAAAAGCCG---TTAAAAAG-CTTGTTTTTGACC    679

BSNT_02463___    680 ATGAACATATATGGGGAATCAG--GCCGAAAAATGTACAGCAGACAATGG    727
                     |.||.||..|.|||||.|||.|  .|||  |||.|||||||||||.||||
BL02972___yla    680 AGGAGCAGGTTTGGGGCATCCGTTCCCG--AAACGTACAGCAGACGATGG    727

BSNT_02463___    728 CTTTAGAGCTTTTGCTGCGGGAAGATATTCCGCTTGTCACCCTGATCGGA    777
                     |.||.||.|||.|..|..|..|||||||||||||||||||||||||||||
BL02972___yla    728 CGTTGGAACTTCTATTAAGACAAGATATTCCGCTTGTCACCCTGATCGGA    777

BSNT_02463___    778 AAAGCAGGAACCGGCAAAACGCT-CTTAACTTTGGCGGCAGGGCTATTAC    826
                     |||||.||.||.||.|||||.|| ||| .|..||||.||.||..|..|.|
BL02972___yla    778 AAAGCCGGCACAGGAAAAACACTGCTT-GCGCTGGCAGCCGGATTGCTGC    826

BSNT_02463___    827 AGACAGAAGA-CTTGGGAATATATAAAAAGCTGGTTGTCGCAAGGCCGAT    875
                     |||||||.|| ||.|||||| |.||||||.||.||||||.||||||||||
BL02972___yla    827 AGACAGAGGATCTGGGGAAT-TTTAAAAAACTTGTTGTCACAAGGCCGAT    875

BSNT_02463___    876 TGTTCCTGTTGGCAAGGACATCGGGTATTTGCCAGGTGAAAAAGAGGAAA    925
                     .||||||||.||.||.||..||||.|||.|.||.|||||||||||.||||
BL02972___yla    876 CGTTCCTGTCGGAAAAGATCTCGGCTATCTTCCGGGTGAAAAAGAAGAAA    925

BSNT_02463___    926 AGCTAAAGCCTTGGATGCAGCCGATTTTTGACAACTTAGAGTTTCTGTTT    975
                     |.||....||.|||.|.|||||.||||||||.|||.|.||.|...||||.
BL02972___yla    926 AACTTCGACCGTGGGTCCAGCCTATTTTTGATAACCTGGAATACTTGTTC    975

BSNT_02463___    976 AATGCAAAAAAACCAGGGGAGCTTGATGCTATTTTGGCGGGAATTGGCTC   1025
                     ||||||||||||||.|||||.|||||||.||||||||||||.||.|||||
BL02972___yla    976 AATGCAAAAAAACCGGGGGAACTTGATGATATTTTGGCGGGGATGGGCTC   1025

BSNT_02463___   1026 AATTCAGGTAGAGGCGCTGACTTATATCAGAGGGAGAAGCATTCCAGATC   1075
                     .|||||.||.||.||.||.||||||||.||.||.|||||||||||.||.|
BL02972___yla   1026 CATTCAAGTCGAAGCCCTTACTTATATAAGGGGCAGAAGCATTCCCGACC   1075

BSNT_02463___   1076 AATTTATTATCATTGATGAAGCGCAAAATTTGACCAGGCATGAGGTGAAA   1125
                     ||||.||.|||||||||||.||.||||||.||||||.||||||.||.|||
BL02972___yla   1076 AATTCATCATCATTGATGAGGCCCAAAATCTGACCAAGCATGAAGTCAAA   1125

BSNT_02463___   1126 ACGTTGCTGACGAGAGTCGGTGAAGGCAGTAAAATTGTCTTAATGGGTGA   1175
                     |||.|.|||||..|.|||||.||||||||.|||||.||.||.|||||.||
BL02972___yla   1126 ACGCTTCTGACACGCGTCGGGGAAGGCAGCAAAATCGTATTGATGGGAGA   1175

BSNT_02463___   1176 CCCTGAACAAATTGATCACCCATATTTAGACAGTCTGAACAATGGTTTGG   1225
                     ..|.|||||.||.|||||.||.|||||.||.....|||||||.||..|||
BL02972___yla   1176 TACCGAACAGATCGATCATCCTTATTTGGATGCGATGAACAACGGCCTGG   1225

BSNT_02463___   1226 CCTATGTGGTTGAGCGGTTTAAAGGACAACCCATCTCAGGCAGCGTGAAG   1275
                     |||||||.||.|||||.|||||||..|||...||.||.||.|.|||||||
BL02972___yla   1226 CCTATGTAGTAGAGCGCTTTAAAGATCAAAAAATTTCCGGAAACGTGAAG   1275

BSNT_02463___   1276 CTGTTAAAAGGTGAGAGATCAGGTCTCGCCCAGCTCGCAGCTGATTTGCT   1325
                     ||.||||||||.|||.|.||..|.||.||...|||.|||||.||..||||
BL02972___yla   1276 CTTTTAAAAGGAGAGCGCTCCCGGCTTGCAAGGCTTGCAGCAGACCTGCT   1325

BSNT_02463___   1326 GTAA   1329
                     ||||
BL02972___yla   1326 GTAA   1329


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