Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02466 and BL02974

See Amino acid alignment / Visit BSNT_02466 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:01
# Commandline: needle
#    -asequence dna-align/BSNT_02466___ylaN.1.5803.seq
#    -bsequence dna-align/BL02974___ylaN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02466___ylaN-BL02974___ylaN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02466___ylaN-BL02974___ylaN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02466___ylaN
# 2: BL02974___ylaN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity:     233/283 (82.3%)
# Similarity:   233/283 (82.3%)
# Gaps:           2/283 ( 0.7%)
# Score: 953.0
# 
#
#=======================================

BSNT_02466___      1 TTGGCTTCAGAGATGATAGTTGACCATCGGCAAAAAGCTTTTGAACTCTT     50
                     |||||.||.|||||..||||.||||||||..|||||||..|||..||.||
BL02974___yla      1 TTGGCGTCTGAGATTGTAGTCGACCATCGTGAAAAAGCACTTGCTCTGTT     50

BSNT_02466___     51 AAAA-GTGGACGCTGAGAAGATTTTGAAGCTGATCCGAGTACAAATGGAT     99
                     |||| || ||.|||||.||.||.||.||||||||.|.|||.||||||||.
BL02974___yla     51 AAAACGT-GATGCTGATAAAATCTTAAAGCTGATTCAAGTGCAAATGGAC     99

BSNT_02466___    100 AACTTAACGATGCCTCAATGTCCTCTATATGAAGAGGTTTTAGATACTCA    149
                     ||||||||||||||||||||||||||.||||||||||||||||||||.||
BL02974___yla    100 AACTTAACGATGCCTCAATGTCCTCTTTATGAAGAGGTTTTAGATACACA    149

BSNT_02466___    150 AATGTTCGGGCTTTCGAGGGAAATCGATTTTGCTGTCCGCCTGGGATTGG    199
                     |||||||||.||.||.||.|||||.|||||||||||||||||.|||||.|
BL02974___yla    150 AATGTTCGGACTCTCTAGAGAAATTGATTTTGCTGTCCGCCTTGGATTAG    199

BSNT_02466___    200 TTGATGAAAAAGACGGTAAAGACCTTTTATACACATTGGAACGCGAATTG    249
                     |.||||||.||||.||||||||.||..|.||||...||||.||.||||||
BL02974___yla    200 TGGATGAAGAAGAGGGTAAAGAACTGCTTTACAGGCTGGAGCGTGAATTG    249

BSNT_02466___    250 TCTGCTTTACATGACGCGTTTACAGCTAAATAA    282
                     |||||.||||||||.||.||||||...||||||
BL02974___yla    250 TCTGCATTACATGATGCATTTACAAAAAAATAA    282


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