Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02472 and BL02979

See Amino acid alignment / Visit BSNT_02472 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:03
# Commandline: needle
#    -asequence dna-align/BSNT_02472___ctaB.1.5803.seq
#    -bsequence dna-align/BL02979___ctaB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02472___ctaB-BL02979___ctaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02472___ctaB-BL02979___ctaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02472___ctaB
# 2: BL02979___ctaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 938
# Identity:     676/938 (72.1%)
# Similarity:   676/938 (72.1%)
# Gaps:          31/938 ( 3.3%)
# Score: 2360.0
# 
#
#=======================================

BSNT_02472___      1 ATGGCTAACTCCAGAATCTTAAA--TGATACAGCTATAGACGGACAAATT     48
                     ||||||.|..|.||||  |||.|  |||||||||.||..|.||||||||.
BL02979___cta      1 ATGGCTGAAACAAGAA--TTACAGCTGATACAGCAATGAATGGACAAATA     48

BSNT_02472___     49 GAAGAAACAACGGCATGGAAAGATTTTCTGTCCCTTATTAAAATAGGGAT     98
                     |||||.||.||.||||||||||||||.||..|||||||.|||.|.|||||
BL02979___cta     49 GAAGAGACGACAGCATGGAAAGATTTCCTCGCCCTTATCAAAGTCGGGAT     98

BSNT_02472___     99 CGTCAATTCTAACCTCATCACGACTTTCACTGGAATGTGGCTTGC-----    143
                     .||..|.||.|||||.||.||.|||||.||.||.||||||||.||     
BL02979___cta     99 TGTTTACTCGAACCTGATAACAACTTTTACGGGCATGTGGCTCGCTTTTT    148

BSNT_02472___    144 ACTGCATATATCCGGTTTAAGTTTTTTAGGCAATATAAACACCGTTCTTC    193
                     |||     |.||...|.|.||.|||.||||.||..|..|.|.|||.||..
BL02979___cta    149 ACT-----TTTCAAATCTGAGCTTTCTAGGAAACCTTGATATCGTGCTGT    193

BSNT_02472___    194 TTACGTTAATCGGGTCTTCACTGATTATTGCGGGCTCCTGCGCGATCAAT    243
                     |.||.|||...|||||.||.||.||||||||.|||||.||||..|||||.
BL02979___cta    194 TCACTTTAGCGGGGTCCTCGCTTATTATTGCAGGCTCATGCGTCATCAAC    243

BSNT_02472___    244 AACTGGTATGACCGGGACATTGACCATCTTATGGAGCGTACGAAAGTAAG    293
                     ||||..||||||||.||.||||||||.||.|||.||||.||||.|..|||
BL02979___cta    244 AACTTTTATGACCGTGATATTGACCAGCTCATGCAGCGGACGAGAACAAG    293

BSNT_02472___    294 ACCGACGGTTACGGGTAAAATTCAGCCGAGTCAGGCGTTATGGTCTGGAA    343
                     .||||||||.||.||.|||||.|||||....|||||.||.||||..||.|
BL02979___cta    294 GCCGACGGTGACTGGAAAAATCCAGCCTTCACAGGCATTGTGGTTCGGCA    343

BSNT_02472___    344 TTTTGCTGGTTGCTTTAGGATTGATCATGCTGCTGATGAC--AACTGTCA    391
                     ||.|||||..|||..|.||.||.|||||||||||||||||  |.|||.||
BL02979___cta    344 TTCTGCTGACTGCGCTCGGTTTTATCATGCTGCTGATGACCAATCTGACA    393

BSNT_02472___    392 TGGCTGCTGTTATCGGTTTTATCGGAGTCTTTACGTATGTTGTAT-TGTA    440
                       |||||.|...|.||.|||.||||.|||||||||||.| |||.| |.||
BL02979___cta    394 --GCTGCCGGAGTAGGATTTGTCGGCGTCTTTACGTACG-TGTTTCTATA    440

BSNT_02472___    441 CACAATGTGGACGAAACGCCGCTATACGATTAACACAGTAGTAGGAAGCG    490
                     |||.||||||.|.||.|||||||||||..||||.||..|..|.|||||.|
BL02979___cta    441 CACGATGTGGTCAAAGCGCCGCTATACCGTTAATACGATCATCGGAAGTG    490

BSNT_02472___    491 TTTCCGGTGCAGTGCCGCCGCTTATTGGATGGACGGCAGTGGAAGGGAAT    540
                     |.||.||.||.||.||.||..|.||.||||||||.||.||..||||....
BL02979___cta    491 TGTCAGGGGCTGTTCCACCTTTGATCGGATGGACCGCTGTCCAAGGTTCC    540

BSNT_02472___    541 ATCGGTGTCGTAGCATGGGTGTTATTCATGATTTTATTTATTTGGCAGAT    590
                     |||||.||||..||.||||||.|.||..|.|||.|.||||||||||||||
BL02979___cta    541 ATCGGAGTCGAGGCGTGGGTGCTGTTTTTAATTATGTTTATTTGGCAGAT    590

BSNT_02472___    591 TCCTCACTTCTTAGCATTGGCTATTAAGAAAACAGAGGATTACAGAGCTG    640
                     |||.|||||..|.||..|.||.|||||||||||.|||||.||||||||.|
BL02979___cta    591 TCCCCACTTTCTGGCGCTTGCGATTAAGAAAACGGAGGAATACAGAGCCG    640

BSNT_02472___    641 CAAATATTCCGATGCTTCCTGTCGTATACGGATTTGAAGTGACAAAAAGA    690
                     |||||||.||||||||.|||||.|||.||||.|||||||||||.|||||.
BL02979___cta    641 CAAATATACCGATGCTGCCTGTTGTACACGGTTTTGAAGTGACGAAAAGG    690

BSNT_02472___    691 CAAATTATTGTGTGGGTTGCGTGCCTGATGCCGCTTCCGTTTTTCCTTGG    740
                     ||.||.||..|.|||.||||.|||.|.||||||||.|||||||||||.||
BL02979___cta    691 CAGATCATCATTTGGATTGCCTGCTTAATGCCGCTGCCGTTTTTCCTGGG    740

BSNT_02472___    741 TAGCCTGGGTCTTCCGATTGTGATTCTCGGCTTGCTGTTAAATATCGGCT    790
                     ..|.||.||.||.|||||.||.|||.|.||...|.||.|.||||||||||
BL02979___cta    741 CGGACTCGGACTGCCGATCGTCATTTTGGGGACGGTGCTTAATATCGGCT    790

BSNT_02472___    791 GGCTGATTCTTGGCTTAATGGGATTCCGCTCCAAGAATATCATGAAGTGG    840
                     ||||..||...||..|..|.||.|.|.|...|||.|||||||||||||||
BL02979___cta    791 GGCTCGTTTGCGGTCTGGTCGGTTACAGAAGCAAAAATATCATGAAGTGG    840

BSNT_02472___    841 GCAACACAAATGTTCGTTTACTCGCTTAACTACATGACAATCTATTTCGT    890
                     |||||.|..|||||.||.||.||..|.||.|||.||||.||.|..|||||
BL02979___cta    841 GCAACGCTCATGTTTGTATATTCATTAAATTACTTGACCATTTTCTTCGT    890

BSNT_02472___    891 TGCCATGGTTGTCTTGACGCTTTTCTAA----------    918
                     |||||||||.||.||.||.||||| |||          
BL02979___cta    891 TGCCATGGTCGTATTTACACTTTT-TAAAATTGGATAG    927


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