Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02475 and BL02980

See Amino acid alignment / Visit BSNT_02475 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:03
# Commandline: needle
#    -asequence dna-align/BSNT_02475___ctaC.1.5803.seq
#    -bsequence dna-align/BL02980___ctaC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02475___ctaC-BL02980___ctaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02475___ctaC-BL02980___ctaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02475___ctaC
# 2: BL02980___ctaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1109
# Identity:     770/1109 (69.4%)
# Similarity:   770/1109 (69.4%)
# Gaps:          79/1109 ( 7.1%)
# Score: 2516.0
# 
#
#=======================================

BSNT_02475___      1 ATGGTAAAGCATTGGCGTCTTAT-------TTTATTATTAGCCTTAGTGC     43
                     |||.|||||.|.||||||||.||       ||.|.||||       .||.
BL02980___cta      1 ATGTTAAAGAAATGGCGTCTGATGTCGCTGTTCACTATT-------TTGG     43

BSNT_02475___     44 CGCTTCTATTAAGC-GGATGTGGAAAACCTTTTTTATCCACGCTCAAGCC     92
                     |||||.| ||.||| ||.||.|||.||||.|||.||||.|||||..||||
BL02980___cta     44 CGCTTGT-TTTAGCAGGGTGCGGAGAACCGTTTATATCAACGCTGCAGCC     92

BSNT_02475___     93 TGCTGGCGAGGTGGCTGATAAACAGTTTGACCTGACAGTGCTCAGCACAT    142
                     .||.|||||||||||||||.|.||||.|..|||.|...|.||||||||..
BL02980___cta     93 GGCGGGCGAGGTGGCTGATCAGCAGTATTTCCTAATGATTCTCAGCACGC    142

BSNT_02475___    143 TGATTATGGTGGTTGTTGTTGCAGTAGTATCTGTTATCTTCTTTTATGTG    192
                     ||||.|||||.||||||||.|.|||.|||..|.|.||.|||.|.|.|||.
BL02980___cta    143 TGATCATGGTTGTTGTTGTAGTAGTGGTAAGTTTCATTTTCGTATTTGTC    192

BSNT_02475___    193 ATTGTGAGATTCAGAAGATCACGGGTCGGTGA-GAACACGATACCGAAAC    241
                     ||.||.|..|.|||||||||...|.||||||| ||.||| ||.|||||||
BL02980___cta    193 ATCGTCAAGTACAGAAGATCTAAGCTCGGTGATGACCAC-ATCCCGAAAC    241

BSNT_02475___    242 AGGTAGAGGGGAA---TAAATTTTTAGAAATCACATGGACCGTGATCCCG    288
                     ||||.||.||.||   .||   |||||||||...||||||.||.||.|||
BL02980___cta    242 AGGTTGAAGGAAACCGCAA---TTTAGAAATTTTATGGACTGTTATTCCG    288

BSNT_02475___    289 ATTTTGCTGCTCATTATTCTTGTGATTCCTGTTGTATTATATACGCTAGA    338
                     |||.|.||.||..||||.||.||..||||||||||...|.|.||..|.||
BL02980___cta    289 ATTATCCTCCTTCTTATCCTGGTTGTTCCTGTTGTCGCACAGACCTTTGA    338

BSNT_02475___    339 GCTAGCGGACACATCACCAATGGATAAAAAA-----GG--CCGCAAAGCT    381
                     .||.||.||.||...|||.||||||||.|||     ||  |||.|     
BL02980___cta    339 TCTTGCTGATACGAAACCGATGGATAAGAAAAACAGGGATCCGGA-----    383

BSNT_02475___    382 GAGGATGCTCTTGTAGTCAATGTTAGGGCAAATTTATACTGGTGGGAGTT    431
                     ||.||.||||  ||.|||||.||..||||.||..|.|||||||||||.||
BL02980___cta    384 GAAGACGCTC--GTCGTCAACGTGCGGGCGAACCTTTACTGGTGGGAATT    431

BSNT_02475___    432 TGAGTACCCTGATTACGACATTATCACAAGCCAGGAGCTGATTGTACCGA    481
                     .||.||.|||||.||||.|.|.||.||.||||||||||||.|.||.||||
BL02980___cta    432 CGAATATCCTGACTACGGCGTGATTACGAGCCAGGAGCTGGTCGTGCCGA    481

BSNT_02475___    482 CAGATCAGCGTGTATATTTTAATTTAAAAGCCTCTGATGTAAAACATTCC    531
                     |.|||.|.||..|.||.||.||..|.|||||.||.|||||.||||||||.
BL02980___cta    482 CCGATGAACGCATTTACTTCAAGCTGAAAGCTTCCGATGTCAAACATTCA    531

BSNT_02475___    532 TTCTGGATTCCTTCAGTTGGAGGAAAACTTGATACGAATACGGATAATGA    581
                     ||||||||||||||.||.||.||.||..||||||||||.||.||.|||||
BL02980___cta    532 TTCTGGATTCCTTCTGTCGGGGGCAAGGTTGATACGAACACAGACAATGA    581

BSNT_02475___    582 AAATAAGTTCTTCCTGACATTTGATTCAAAACGAAGC--AAAGAGGCAGG    629
                     |||.|||||||.|.|.||..||||||||||||| .||  ||| |.||.||
BL02980___cta    582 AAACAAGTTCTACTTAACGATTGATTCAAAACG-GGCGGAAA-AAGCCGG    629

BSNT_02475___    630 AGA-TATGTTTTTTGGGAAGTGTGCAGAGCTTTGCGGCCCTTCACATGCG    678
                     ||| ||| ||.|..|||||.||.||.|||||.|||||.|||||.||.||.
BL02980___cta    630 AGACTAT-TTCTACGGGAAATGCGCCGAGCTCTGCGGACCTTCCCACGCT    678

BSNT_02475___    679 CTGATGGATTTTAAGGTGAAGACGATGTCTGCAAAAGAAT---TTC-AGG    724
                     .|.|||||.|||||.||.||..||.|.||    .|||.||   ||| ||.
BL02980___cta    679 TTAATGGACTTTAAAGTTAAAGCGGTTTC----GAAGGATGAGTTCAAGA    724

BSNT_02475___    725 GCTGGACAAAAGAAATGAAAAACTATAAATCTACAGCAGAGAGCGATTTG    774
                     ..||||..|..||.|||.|||||.|||||.|...|||..|.|.||||.|.
BL02980___cta    725 AATGGATGAGCGATATGGAAAACAATAAAGCGGAAGCGAAAACCGATCTC    774

BSNT_02475___    775 GCT----AAGCAGGGTGAAGAACTGTTTAAAGAGAAAAACTGCCTGAGCT    820
                     |||    ||    ||.|||.|..||||.||||||||||||||||||||||
BL02980___cta    775 GCTGTTGAA----GGAGAAAAGGTGTTCAAAGAGAAAAACTGCCTGAGCT    820

BSNT_02475___    821 GCCATGCGGTAGAGCCGAATGATAAG-----CGTGCAGAAGCCGCTAGAA    865
                     |.||||||     .||||.|.|.|||     .|.||.|||||.||.||||
BL02980___cta    821 GTCATGCG-----ACCGATTCAAAAGACCAAAGGGCGGAAGCGGCCAGAA    865

BSNT_02475___    866 CGGCACCTAACTTGGCGACCTTCGGTGAAAGGACAAAAGTGGCAGGGGTG    915
                     ||||.||.|||.|.|||||.||.||.||.|||.|.|...|.||.||.|||
BL02980___cta    866 CGGCTCCGAACCTCGCGACTTTTGGAGACAGGTCGACGATCGCCGGCGTG    915

BSNT_02475___    916 AAAGAGGCCAACAAAGAAAATGTGAAGGCTTGGCTAAAGGACCCTGACAG    965
                     ||.||...||||.|.|||||..||||.||.|||||.|||||.|||||.||
BL02980___cta    916 AAGGAATTCAACGATGAAAACTTGAAAGCGTGGCTCAAGGATCCTGAAAG    965

BSNT_02475___    966 CATAAAGCCGGGGAACAAAATGACAGGCACATATCCAAAGCTCTCA--GA   1013
                     ||||||.|||||.|||||||||||.||||||||.||  .|.|.|.|  ||
BL02980___cta    966 CATAAAACCGGGCAACAAAATGACCGGCACATACCC--TGATTTGAGCGA   1013

BSNT_02475___   1014 CAGCGAAACAGATGCGCTTTATGAATACTTAAAAGGCTTAAAAGCGGAA-   1062
                     ||..|||...|||||.||...||||||.|||||.||.||||||.|.||| 
BL02980___cta   1014 CAAGGAACTTGATGCACTGACTGAATATTTAAAGGGGTTAAAAACCGAAG   1063

BSNT_02475___   1063 AGCAAGTAG   1071
                     |..||    
BL02980___cta   1064 ACTAA----   1068


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