Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02477 and BL02982

See Amino acid alignment / Visit BSNT_02477 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:03
# Commandline: needle
#    -asequence dna-align/BSNT_02477___ctaE.1.5803.seq
#    -bsequence dna-align/BL02982___ctaE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02477___ctaE-BL02982___ctaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02477___ctaE-BL02982___ctaE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02477___ctaE
# 2: BL02982___ctaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 641
# Identity:     477/641 (74.4%)
# Similarity:   477/641 (74.4%)
# Gaps:          34/641 ( 5.3%)
# Score: 1772.0
# 
#
#=======================================

BSNT_02477___      1 ATGCA---AGTTCAAGAAAAATTCACCGCAGAAACCTTTCCAGCTTCTCC     47
                     |||||   ||   ||||.|||||.||.||.||||||||.||.||||||||
BL02982___cta      1 ATGCATACAG---AAGAGAAATTGACGGCTGAAACCTTCCCGGCTTCTCC     47

BSNT_02477___     48 CGAAAAAGTAACCCTGGAAGGGAAAAATAAATTTTTAGGCTTTTGGCTTT     97
                     .|||||||..||..|.|||||.||||||||||||.|.|||||||||||.|
BL02982___cta     48 TGAAAAAGCTACGTTAGAAGGAAAAAATAAATTTATCGGCTTTTGGCTAT     97

BSNT_02477___     98 TTCTTGGCGGAGAGACTGTTCTGTTTGCGTCTCTCTTCGCCACGTTTCTT    147
                     ||||.||.||||||||.|||||.||.||||||||||||||.||.|..|||
BL02982___cta     98 TTCTCGGGGGAGAGACGGTTCTTTTCGCGTCTCTCTTCGCAACATACCTT    147

BSNT_02477___    148 GCGCTTCGGAATTCAAATGCCGGTGATCCGCCTACGACGGAAATGTTCGA    197
                     |||||...||||||.|||||.||.|..|||...|||||.||.||||||||
BL02982___cta    148 GCGCTGAAGAATTCGAATGCAGGGGGGCCGAAAACGACCGAGATGTTCGA    197

BSNT_02477___    198 TGTGACACTTGTATTCATTGCCACAATGCTTCTATTAACGAGCAGTTTAA    247
                     ..||...||.||.||..||||.||||||||.||.||.|||||||||||.|
BL02982___cta    198 CATGGGGCTGGTCTTTCTTGCGACAATGCTCCTTTTGACGAGCAGTTTGA    247

BSNT_02477___    248 CGAGTGTGTACGCGATGTACCACATGAAGAACTTTTCCTTCGGCAAGATG    297
                     ||||.|||||.||||||||.||.|||||.|||||..|.||....||||||
BL02982___cta    248 CGAGCGTGTATGCGATGTATCATATGAAAAACTTCGCTTTTAAAAAGATG    297

BSNT_02477___    298 CAGCTTTGGCTGGGAATTACGATTTTATTGGGGGCCGGCTTTTTAGGACT    347
                     |||.|||||||.|||||.||..||.|..|.||.||.||||||.|.|..||
BL02982___cta    298 CAGGTTTGGCTCGGAATCACCGTTCTGCTCGGTGCAGGCTTTCTGGCGCT    347

BSNT_02477___    348 GGAAATCTATGAGTTCAAGCATTACACCCATGAATTTGGCTTTACCA-TC    396
                     .|||||.||||||||||.||||||||..||.||||.|||.||.|||| ||
BL02982___cta    348 TGAAATATATGAGTTCACGCATTACATTCACGAATATGGGTTCACCATTC    397

BSNT_02477___    397 ACAAGCTCTGCCCTTGGTTCTGCGTTTTACACGCTTGTCGGTACACACGG    446
                     | ||||||.||.||.||.||.||.|||||.|||||||||||.||||||||
BL02982___cta    398 A-AAGCTCGGCTCTCGGCTCCGCTTTTTATACGCTTGTCGGCACACACGG    446

BSNT_02477___    447 CGCCCACGTGGCATTTGGGCTTATGTGGATCAGCACGCTT------ATGA    490
                     .||.|||||..|.||.||||||.|.|||||      .|||      ||||
BL02982___cta    447 AGCACACGTTACCTTCGGGCTTCTCTGGAT------TCTTTCTTTGATGA    490

BSNT_02477___    491 TCCGCAATGCTAAGAGAGGGC-------TGAATCTGTATACGGCGCCTAA    533
                     ||.|.|||||       ||||       |.|..||.||.|..|||||.||
BL02982___cta    491 TCAGAAATGC-------GGGCCGCGGATTAAGCCTTTACAACGCGCCGAA    533

BSNT_02477___    534 GTTTTACGTTGCCAGCCTTTATTGGCACTTTATTGATGTCGTGTGGGTCT    583
                     |||||..||.||.|||||.||.|||||.|||||.||.||.||.|||||.|
BL02982___cta    534 GTTTTTTGTCGCAAGCCTCTACTGGCATTTTATCGACGTTGTCTGGGTGT    583

BSNT_02477___    584 TCATCTTTACCGTTGTATATTTAATGGGGATGGTGGGATAA    624
                     |.|||||||||||||||||.||.||||||||||||||||||
BL02982___cta    584 TTATCTTTACCGTTGTATACTTGATGGGGATGGTGGGATAA    624


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