Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02479 and BL02984
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:03
# Commandline: needle
# -asequence dna-align/BSNT_02479___ctaG.1.5803.seq
# -bsequence dna-align/BL02984___ctaG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02479___ctaG-BL02984___ctaG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02479___ctaG-BL02984___ctaG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02479___ctaG
# 2: BL02984___ctaG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 951
# Identity: 629/951 (66.1%)
# Similarity: 629/951 (66.1%)
# Gaps: 108/951 (11.4%)
# Score: 1955.0
#
#
#=======================================
BSNT_02479___ 1 ATGAATCAGTTG---------GAGATATTCGGGTTTCGCGCGATGTGGAG 41
||| ||.||||||||.||||||||..|.|||||
BL02984___cta 1 ---------TTGGGCAGCCTTGAAATATTCGGTTTTCGCGCCCTTTGGAG 41
BSNT_02479___ 42 CCCTTATCTTTTTTG----TATCCTGTTAGGCATTACGGCGCTTTATCTC 87
|||.||| ||..|.| |.||.|.|| |||.||.||.|||||
BL02984___cta 42 CCCCTAT-TTCCTAGGGGCTGTCGTTTT---CATAACCGCCCTTTA---- 83
BSNT_02479___ 88 TATTTTTACAGGCGAATGTCTTCAAAGCCGAATCGAATAACTG------- 130
.|||||.|.|..|||...|||...|.|.||| |.|.|.|.|
BL02984___cta 84 -CTTTTTTCTGATGAAACGCTTAGGATCAGAA--GGAGAGCGGGCGTCCA 130
BSNT_02479___ 131 GTAAAGAGAT-GGTGTGCTTTCTGTCGGCGATGCTGTTTTTATATGCAGC 179
|.|||||.|| ||| |..||.|||.||||||||.|..|||||||.||..|
BL02984___cta 131 GGAAAGAAATCGGT-TTATTCCTGACGGCGATGATTCTTTTATACGCGTC 179
BSNT_02479___ 180 CGAGGGAAGCCCGGTTGACCTGCTCGGACATATTATGTTCAGCGCACATA 229
..||||.||.||||||||..||||.||||||||||||||||||||.||||
BL02984___cta 180 TAAGGGCAGTCCGGTTGATTTGCTGGGACATATTATGTTCAGCGCGCATA 229
BSNT_02479___ 230 TGGTGCAGATGGCCGTCCTGTATTTGGTTGTCCCTCCACTGTTAATCGCG 279
|||.|||.|||||.||.|||||||||.|.||.||.||.|||.|.|||...
BL02984___cta 230 TGGCGCAAATGGCGGTTCTGTATTTGATCGTGCCGCCTCTGATCATCCTT 279
BSNT_02479___ 280 GGAATTCCTGCATGGCTCTGGGAAAAAATTA-TTTTCAGGCCTTCAATCA 328
||.||.||..|.|||.|.|||.||||..|.| |||||.|.|..|| .|||
BL02984___cta 280 GGCATACCGCCTTGGTTTTGGAAAAAGGTCATTTTTCTGCCGATC-GTCA 328
BSNT_02479___ 329 AACCGGTTTTTTCC---TTTTTTACAACGCCTTTAATTGCTTTGCTTTTG 375
|.||| .|.|||| ||||||.||| .||.||.||.||..|..|..||
BL02984___cta 329 AGCCG--CTGTTCCGGTTTTTTTCCAA-ACCATTGATCGCGATAATCGTG 375
BSNT_02479___ 376 TTTAACGGCATTTTTTCTTTATATCATGTACCGCTTATATTTGATACTGT 425
||||||||..|.|||||..|.|||||..|.||..|..|.||||||..|.|
BL02984___cta 376 TTTAACGGTCTATTTTCGATGTATCACATTCCATTGGTGTTTGATTTTAT 425
BSNT_02479___ 426 CAAAACCGATTCGTTTTACCATACATTCATCACTTGGCTTATCTTTGTGC 475
.||.||.|||.|..||||.|||.|...|||.||...|||.|||||| .
BL02984___cta 426 AAAGACGGATGCCGTTTATCATGCCGCCATTACCGTGCTGATCTTT---A 472
BSNT_02479___ 476 TTGCA---TTCTTCATGTGGTGGCCGCTTGTTCATAAGGT-GGGGCGTCT 521
||||| ||.|||||||||||||||||.|||||.||||| |.||.| ||
BL02984___cta 473 TTGCAGCGTTTTTCATGTGGTGGCCGCTCGTTCACAAGGTCGAGGAG-CT 521
BSNT_02479___ 522 ACGGCAGCTCAGCGG-CTTGATGAAGCTGGGGTATATTATGGCGGACGGT 570
.|.||||.|.||||| ||| .||||.||.||.||.||||||||.|||||.
BL02984___cta 522 TCCGCAGATGAGCGGACTT-TTGAAACTCGGCTACATTATGGCTGACGGC 570
BSNT_02479___ 571 ATGCTGCTCACACCTGCTTGCGCCTTAATCATGTTCAGCGGTGCGCCGTT 620
||..||||.|||||.||.|||||.||||||||||||||||.|.||.|..|
BL02984___cta 571 ATTTTGCTGACACCGGCGTGCGCGTTAATCATGTTCAGCGATACGGCTCT 620
BSNT_02479___ 621 ATACGCCACCTATACAGATCCGTCTGCATGGGCCGAGGCAATGCGCCTTT 670
.||..|.||.|||.|.||||||||.||||||||.|||||||||...||.|
BL02984___cta 621 GTATTCGACATATTCGGATCCGTCAGCATGGGCGGAGGCAATGAAGCTGT 670
BSNT_02479___ 671 GCGTGCC-------------AGCGGATATGATGGGGCAGGTCCCATTAAC 707
||||.|| |||||| |||| |..|.||
BL02984___cta 671 GCGTTCCTCTCGATACGCTGAGCGGA-ATGA------------CGCTTAC 707
BSNT_02479___ 708 AGGACCGGAGATGTTGAATA-CACTGCCTTTGTTAGAGGATCAGCAGCTC 756
|||.|||||.|||||.|..| || |||||.|..|.||.|||||||||||.
BL02984___cta 708 AGGTCCGGAAATGTTCAGCAGCA-TGCCTGTTCTCGAAGATCAGCAGCTT 756
BSNT_02479___ 757 GGGGCCGTCATGATGAAAATCATTCAGGAAATTGTGTACGGTACTTTTTT 806
||.||..|..|.|||||||||.|.||||||||.||||||||.||.|||||
BL02984___cta 757 GGCGCGATTGTCATGAAAATCCTACAGGAAATCGTGTACGGGACATTTTT 806
BSNT_02479___ 807 GGCGATTATTTTTTTCCAATGGGTGAAGAAAGAAAG---------GGAAA 847
|||||||||.||||||...||||.||.|||.||||| .||||
BL02984___cta 807 GGCGATTATCTTTTTCGGCTGGGCGAGGAAGGAAAGAGCCAAAGACGAAA 856
BSNT_02479___ 848 AGGACGGGCAGGAAGAGCCGCCGTATATTCAGCAG---ACGATATCATAA 894
|||||..|.|.|||||..| |||||| .|.| |||.| ||||.|
BL02984___cta 857 AGGACCTGGAAGAAGAATC-----ATATTC-TCCGTCTACGGT-TCATTA 899
BSNT_02479___ 894 - 894
BL02984___cta 900 A 900
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