Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02484 and BL02987
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence dna-align/BSNT_02484___ylbD.1.5803.seq
# -bsequence dna-align/BL02987___ylbD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02484___ylbD-BL02987___ylbD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02484___ylbD-BL02987___ylbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02484___ylbD
# 2: BL02987___ylbD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 425
# Identity: 300/425 (70.6%)
# Similarity: 300/425 (70.6%)
# Gaps: 55/425 (12.9%)
# Score: 1040.5
#
#
#=======================================
BSNT_02484___ 1 GTGGCGAATCAACATGC-CAATCATTCAATCAATGACTTTAAACAATTCG 49
.||||.||||||.|.|| |||||| ||.||||||||.|||||.|||||..
BL02987___ylb 1 TTGGCAAATCAAAACGCGCAATCA-TCCATCAATGAATTTAAGCAATTTA 49
BSNT_02484___ 50 TCAAAAAGCATCCCAAGCTGATAAAAGAAGTGCGCAAAGAACAAAGAAGC 99
|.|||..||||||.|||.||||....|||||.||.|||.||.|||.||||
BL02987___ylb 50 TAAAACGGCATCCTAAGTTGATTTCCGAAGTCCGGAAACAAGAAAAAAGC 99
BSNT_02484___ 100 TGGCAGGACGTATATGAAAATTGGGTCCTCTTCGGGGAGAG-CGACCCGA 148
||||||||.||.||||||||.|||||..|..||||||| || |||..|||
BL02987___ylb 100 TGGCAGGAAGTCTATGAAAACTGGGTTTTGCTCGGGGA-AGACGATTCGA 148
BSNT_02484___ 149 TTTGGGATCCGTATCGGGAACCGGAAGAAGCTTCTG-----AAGCTGTGC 193
|.|||||||||||..| ||||||||||||.| ||| |.||
BL02987___ylb 149 TATGGGATCCGTACAG------GGAAGAAGCTTCAGCGGAAAAG--GAGC 190
BSNT_02484___ 194 CTGAAACACCGC-----AAAAAAATGATTTTGTCTCGAAAATGGTGACAG 238
|.|| ||| ..|||||.|||||..|.||||||||||||||.|
BL02987___ylb 191 CGGA-----CGCTGGCGGCAAAAACGATTTCATTTCGAAAATGGTGACGG 235
BSNT_02484___ 239 CGGTGAAAAAGATGGATGTCAATCAAATGAACGAACAAATCAATAAAATG 288
|.||...|||||||||||.||||||||||||.||.||.||||||||||||
BL02987___ylb 236 CCGTTCGAAAGATGGATGCCAATCAAATGAATGAGCAGATCAATAAAATG 285
BSNT_02484___ 289 AGCCAGTCGATCTCATCGTTGCAAAGCCTTCTTAATACA-----TTTTC- 332
||||||||.||.||.|||.||||||||.|.|| || |||||
BL02987___ylb 286 AGCCAGTCTATTTCTTCGCTGCAAAGCTTGCT-----CAGCCAGTTTTCG 330
BSNT_02484___ 333 --CGGAAGCGGA------CAGAAGCATTCTCAGCCAGGTTCTGGACAGCA 374
|||||||..| |||||.|| .||| || .||..||||
BL02987___ylb 331 GGCGGAAGCCAAAAACAGCAGAAACA----AAGC--GG---CGGCGAGCA 371
BSNT_02484___ 375 TCCTTTTTCTTTTCGAAAGGATTAA 399
|||.||||||||.|||||.|||||.
BL02987___ylb 372 TCCGTTTTCTTTCCGAAAAGATTAG 396
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