Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02491 and BL02990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence dna-align/BSNT_02491___ylbH.1.5803.seq
# -bsequence dna-align/BL02990___ylbH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02491___ylbH-BL02990___ylbH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02491___ylbH-BL02990___ylbH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02491___ylbH
# 2: BL02990___ylbH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 587
# Identity: 328/587 (55.9%)
# Similarity: 328/587 (55.9%)
# Gaps: 154/587 (26.2%)
# Score: 1042.0
#
#
#=======================================
BSNT_02491___ 0 -------------------------------------------------- 0
BL02990___ylb 1 ATGAGAGTGATTTCTGGGACGTATAAGGGACGTGCCTTAAAGGCGGTTCC 50
BSNT_02491___ 0 -------------------------------------------------- 0
BL02990___ylb 51 CGGCACGTCGACAAGGCCGACGACCGATAAAGTAAAGGAATCCATCTTTA 100
BSNT_02491___ 1 --ATGATCGGCCCTTATTTTGACGGGGGCATGGGACTTGACTTATTCGCA 48
|||.|||||||.||||||||.||.||||..||.|||||..|.|.|||.
BL02990___ylb 101 ATATGGTCGGCCCGTATTTTGAAGGCGGCACCGGCCTTGATCTGTACGCG 150
BSNT_02491___ 49 GGGAGCGGAGGACTTGGAATCGAAGCGCTTTCACGCGGGTTTGAGCATTG 98
||.|||||.|||.|.||.||.||||||||.||.||.||.|||||.|..|.
BL02990___ylb 151 GGAAGCGGCGGATTGGGCATTGAAGCGCTGTCGCGGGGATTTGACCGCTT 200
BSNT_02491___ 99 TATATTCGTTGACCGTGATTTTAAAGCGATTCAAACGGTAAAATCTAATT 148
.||.||.||.|||||.||||||||||||||||||||.||.|||...||||
BL02990___ylb 201 CATTTTTGTCGACCGGGATTTTAAAGCGATTCAAACCGTGAAAGGAAATT 250
BSNT_02491___ 149 TGAAAACGCTGGAGCTTACAAAACATGCAC--AGGTATACCGCAATGATG 196
|||||||||||| |||||.|||| .|||.| |.||.|||.|.|||||.|
BL02990___ylb 251 TGAAAACGCTGG-GCTTAGAAAA-GTGCGCCGAAGTGTACAGAAATGACG 298
BSNT_02491___ 197 CGGAACGAGCTTTGCA--CGCTGCTGCTAAAAGAG----AAACCGGCTTT 240
|.|||||.|||.|||| |.|||.|| |||||.| || |||||
BL02990___ylb 299 CAGAACGGGCTCTGCATGCACTGGTG--AAAAGGGGCGCAA----GCTTT 342
BSNT_02491___ 241 --CGCGGAATTTTTCTCGATCCGCCGTATAAGGAACAAAAGCTGAAAGCA 288
.||.| |.|||.|.||.|||||.|||...||.|||||||||.||||.
BL02990___ylb 343 GATGCCG--TCTTTTTGGACCCGCCATATCGAGAGCAAAAGCTGGAAGCG 390
BSNT_02491___ 289 CTTTTAACGCTGATTGACGAATATCAAATGCTG---GAAGAAGACGGCTT 335
||||||.||.|.|||||.|||....|.|||||| || |||| ||.||
BL02990___ylb 391 CTTTTATCGATCATTGATGAAGCGGATATGCTGACTGA--AAGA-GGGTT 437
BSNT_02491___ 336 TATCGTCGCTGAGCATGACAGAGAGGTCGAGCTTCCCGAAACCGTAGGAG 385
|||.||.||||||||||..|..||.|||..|||.||.||..|.|..||.|
BL02990___ylb 438 TATTGTGGCTGAGCATGCGAAGGAAGTCATGCTGCCGGATGCGGCGGGCG 487
BSNT_02491___ 386 ATCTTGTGAT-----GACAAGAAAAGAAACCTAT--GGGTTAACAGGTGT 428
..|||..|.| |.||.|||| ||| ||.||||||||.||
BL02990___ylb 488 GACTTCAGCTTGCCCGGCAGGAAA-------TATACGGCTTAACAGGCGT 530
BSNT_02491___ 429 GGCGATTTATAAAAAGAGGGGG------------TAG 453
|.|.||.||.|.||||||.||| |||
BL02990___ylb 531 GACCATATACAGAAAGAGAGGGAATGGGGATGGCTAG 567
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