Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02481 and BL03000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence dna-align/BSNT_02481___ylbA.1.5803.seq
# -bsequence dna-align/BL03000___ylbA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02481___ylbA-BL03000___ylbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02481___ylbA-BL03000___ylbA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02481___ylbA
# 2: BL03000___ylbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity: 243/387 (62.8%)
# Similarity: 243/387 (62.8%)
# Gaps: 51/387 (13.2%)
# Score: 667.0
#
#
#=======================================
BSNT_02481___ 1 GTGTTGAAGTTTACTGAAAGCGGACTTGAAGGGGTTAAGGCTGAGCTCAG 50
.||||.|||...|||..||||.|||||||..|.|..||.||.||.|.
BL03000___ylb 1 ---ATGAAATTTGAAGAATCCGGAATTGAAGGATTGACTGCCGACCTTAA 47
BSNT_02481___ 51 CTGGCTAGACGACTTAATGGAAAGCAAAGGTCTCATCAGAGCGGGTCAAT 100
|.||.||||||||.|.|||||||.|.||||..||.|.|||||.||.||||
BL03000___ylb 48 CCGGTTAGACGACATCATGGAAAACGAAGGGTTCGTAAGAGCTGGACAAT 97
BSNT_02481___ 101 GGGATTACGAGAGAGTCACCTATGAC----AAGAAGTTTTCG--ACGATT 144
|||||||.||..|.|||||.|||||| || |||| |.|.|.
BL03000___ylb 98 GGGATTATGAACGCGTCACATATGACCGCAAA------TTCGATATGGTC 141
BSNT_02481___ 145 GAGGGCACGTTTTACCT--GCGGATACAAGGAATTGCGGCA--GAGGGTG 190
||.||.|..||.||||| |||..|.| |||..||| || ||.||||
BL03000___ylb 142 GAAGGAAGATTCTACCTTCGCGTGTTC--GGATATGC--CATCGAAGGTG 187
BSNT_02481___ 191 ATGTCGGAAGCGGACGCGCGGTGATTCAATTAATGTCCCCTCTCCTAGGC 240
|.||.||...|.|.||||||||.||..||.|.|||.|.||.||..|.|||
BL03000___ylb 188 ACGTGGGCGCCCGGCGCGCGGTAATCAAACTGATGACGCCGCTTTTGGGC 237
BSNT_02481___ 241 AAGCATTATTACCCGCACGGAGTAGAGTATGGAGAA-ACGGAAGAGTTTC 289
||..|||||||.|||||.|||||.||.||.||.||| || |||.|.||||
BL03000___ylb 238 AAATATTATTATCCGCATGGAGTGGAATACGGCGAAGAC-GAACATTTTC 286
BSNT_02481___ 290 --CCGTACAGGTTGTGACAAAAAGCAAAGCACTGATTCAGGACATATCCG 337
||| |||.|..|.|.||.||||||..|..||.| || ||.||
BL03000___ylb 287 CGCCG--CAGCTCCTCAAAACAAGCAAGACGGTGCT----GA---ATTCG 327
BSNT_02481___ 338 ACATGTTAAAAA--------CAG---TTCAAATGTAA 363
| |.|||.| ||| ||.||.||||.
BL03000___ylb 328 A----TCAAAGAAAAGGTTTCAGCGCTTGAAGTGTAG 360
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