Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01346 and BL03013

See Amino acid alignment / Visit BSNT_01346 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:52
# Commandline: needle
#    -asequence dna-align/BSNT_01346___acoB.1.5803.seq
#    -bsequence dna-align/BL03013___acoB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01346___acoB-BL03013___acoB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01346___acoB-BL03013___acoB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01346___acoB
# 2: BL03013___acoB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1051
# Identity:     787/1051 (74.9%)
# Similarity:   787/1051 (74.9%)
# Gaps:          38/1051 ( 3.6%)
# Score: 2898.0
# 
#
#=======================================

BSNT_01346___      1 ATGGCGAGAGTCATAAGCATGTCAGACGCGATCAATGAAGCAATGAAGCT     50
                     |||.||||.|..||.||||||||||.|||..|.||||||||.||.||.||
BL03013___aco      1 ATGACGAGGGAAATCAGCATGTCAGCCGCATTGAATGAAGCGATCAAACT     50

BSNT_01346___     51 TGCGATGAGAAGAGATGAAAATGTGCTTTTGATCGGTGAGGATGTCGCCG    100
                     ||||||||||||.||.||..|.||..||||.||.||.||.||||||||.|
BL03013___aco     51 TGCGATGAGAAGGGACGATCACGTCATTTTAATGGGGGAAGATGTCGCAG    100

BSNT_01346___    101 GGGGAGCGGCTGTCGATCATTTGCAGGATGATGAAGCATGGGGCGGTGTA    150
                     |.||||||..||||||||||.||||||||||||||||||||||||||||.
BL03013___aco    101 GAGGAGCGAATGTCGATCATCTGCAGGATGATGAAGCATGGGGCGGTGTG    150

BSNT_01346___    151 TTAGGGGTCACAAAGGGGCTCGTACAGGAATT----CGGGCGTACAAGAG    196
                     .|.||.|||||.||.|||.|.||.||||||||    ||||.|    .|.|
BL03013___aco    151 CTCGGCGTCACGAAAGGGATTGTTCAGGAATTTGGACGGGAG----CGCG    196

BSNT_01346___    197 TGCTGGACACACCGATTTCTGAGGCGGGCTATATGGGTGCGGCTATGGCT    246
                     |.||.||.||.|||||...|||.|||||.||.||.||.||.||.||||||
BL03013___aco    197 TCCTTGATACGCCGATCAGTGAAGCGGGGTACATCGGCGCAGCCATGGCT    246

BSNT_01346___    247 GCGGCATCAACCGGTTTGAGACCGATTGCCGAGCTGATGTTTAACGATTT    296
                     ||.||.|||||||||||.||.|||||.||.||..||||||||||||||||
BL03013___aco    247 GCTGCTTCAACCGGTTTAAGGCCGATCGCGGAATTGATGTTTAACGATTT    296

BSNT_01346___    297 TATCGGCACGTGCTTTGACCAGGTGATCAACCAAGGGGCGAAATTCCGTT    346
                     ||||||.||.||.||.|||||||||.|.|||||.||.|||||||||||.|
BL03013___aco    297 TATCGGAACATGTTTGGACCAGGTGCTGAACCAGGGAGCGAAATTCCGCT    346

BSNT_01346___    347 ACATGTTTGGCGGAAAAGCGCAAGTGCCGATTACCGTCCGCACCACATAC    396
                     |||||||||||||.||||||.||||.||||||||..||||.||.||..||
BL03013___aco    347 ACATGTTTGGCGGCAAAGCGGAAGTTCCGATTACGATCCGGACGACCCAC    396

BSNT_01346___    397 GGAGCAGGGTTCCGGGCCGCTGCCCAGCATTCAC-AAGCGCTGTATGGCC    445
                     ||.||.||.||..||||.||.|||||||||||.| |||| .||||||.||
BL03013___aco    397 GGCGCCGGCTTTAGGGCGGCCGCCCAGCATTCGCAAAGC-TTGTATGCCC    445

BSNT_01346___    446 TTTTCACGAGCATCCCTGGACTGAAGACAG---TTGTTCCATCCAATCCG    492
                     |.||.||.|||||.||.||||||||   ||   ||||.||.||.|..|||
BL03013___aco    446 TATTTACAAGCATTCCCGGACTGAA---AGTGATTGTGCCGTCGACCCCG    492

BSNT_01346___    493 TATGATGCCAAAGGTCTTCTGCTTGCAGCAATAGAAGATAATGATCCGGT    542
                     ||.||.||.|||||..|..||||.||.||.||.||||||.|.||.|||||
BL03013___aco    493 TACGACGCAAAAGGATTATTGCTCGCTGCGATTGAAGATCAGGACCCGGT    542

BSNT_01346___    543 GTTCTTCTTTGAAGACAAAACGTCCTACAACATGAAGGGCGAGGTGCCGG    592
                     ..||||.|||||||||||||||...||||||||||..|||||.|||||||
BL03013___aco    543 TATCTTTTTTGAAGACAAAACGCTGTACAACATGACAGGCGATGTGCCGG    592

BSNT_01346___    593 AAGATTATTATACAATTCCCCTTGGAAAAGCGGATATCAAACGCGAGGGC    642
                     ||||.|||||.||..||||..|.||||||||.||||||||.||..|.|||
BL03013___aco    593 AAGAATATTACACGCTTCCAATCGGAAAAGCAGATATCAAGCGGAAAGGC    642

BSNT_01346___    643 AATGATGTTACGCTCTTTGCAGTCGGCAAGCAGGTCAATACTGCGCTTGA    692
                     ...|||||.|||.|..|||||.|||||||.|||||..||||.||||||.|
BL03013___aco    643 GCCGATGTAACGATTGTTGCAATCGGCAAACAGGTTCATACGGCGCTTCA    692

BSNT_01346___    693 AGCGGCTGCACAGCTTTCAGAGAGGGGCATCGAAGCCGAGGTCCTTGATC    742
                     ||||||.|.||||||.||||.|.||||.|||||||||||..|||||||||
BL03013___aco    693 AGCGGCGGAACAGCTCTCAGCGCGGGGAATCGAAGCCGAAATCCTTGATC    742

BSNT_01346___    743 CGCGCAGTCTGTCCCCTCTGGATGAGGATGCGATTTTCACATCGTTAGAA    792
                     ||||.||.||.||.||.||.|||||.||.||..|..|..||||..|||||
BL03013___aco    743 CGCGAAGCCTTTCGCCGCTTGATGAAGAGGCCGTCCTTGCATCCGTAGAA    792

BSNT_01346___    793 AAAACAAATCGTCTGATCATCATTGATGAAGCCAATCCGCGATGCAGCAT    842
                     ||||||||..|.||..|.|||.|.|||||.|||||||||.||||||||||
BL03013___aco    793 AAAACAAACAGGCTTGTGATCGTCGATGAGGCCAATCCGAGATGCAGCAT    842

BSNT_01346___    843 TGCCACGGATATTGCTGCGC----TTGTC-GCTGACAAGGGCTTTGATTT    887
                     .|||.|||||||     |||    |||.| ||.||.||.||.|||||||.
BL03013___aco    843 CGCCGCGGATAT-----CGCATCATTGGCGGCAGATAAAGGATTTGATTC    887

BSNT_01346___    888 GCTTGATGCGCCGATTAAACGGATTACAGCGCCGCATACACCGGTTCCGT    937
                     ||||||.||.|||.|||||..|.|.||.||.||||||||.|||||.||.|
BL03013___aco    888 GCTTGACGCACCGGTTAAAAAGGTGACGGCTCCGCATACGCCGGTGCCAT    937

BSNT_01346___    938 TTTCACCAGTGCTTGAAGATCAATATTTGCCGACACCAGATAAAATTGT-    986
                     |||||||....||||||||.|..|||||||||||.||.||.|||.|.|| 
BL03013___aco    938 TTTCACCGCCTCTTGAAGACCTGTATTTGCCGACGCCGGAAAAAGTCGTG    987

BSNT_01346___    987 --CAGCGTCACGCTTGAATTGCTTGGCGAGCCGGCAATGAAT------TA   1028
                       ||.|||   ||||||..||||.||.||..|..|||...||      ||
BL03013___aco    988 AACACCGT---GCTTGAGATGCTCGGAGAAACATCAACACATACGGTGTA   1034

BSNT_01346___   1029 A   1029
                     |
BL03013___aco   1035 A   1035


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