Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01360 and BL03017
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:53
# Commandline: needle
# -asequence dna-align/BSNT_01360___malA.1.5803.seq
# -bsequence dna-align/BL03017___glvA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01360___malA-BL03017___glvA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01360___malA-BL03017___glvA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01360___malA
# 2: BL03017___glvA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1379
# Identity: 1020/1379 (74.0%)
# Similarity: 1020/1379 (74.0%)
# Gaps: 58/1379 ( 4.2%)
# Score: 3667.5
#
#
#=======================================
BSNT_01360___ 1 ATGAAGAAAAAATCATTCTCAATCGTAATAGCGGGCGGAGGGAGCACTTT 50
|||.|.|||| |.|..||.||.||.||.||.||||||||.|||||.||
BL03017___glv 1 ATGGATAAAA---CGTATTCGATTGTCATTGCAGGCGGAGGAAGCACATT 47
BSNT_01360___ 51 CACTCCAGGGATCGTACTCATGCTCTTGGACCATTTGGAGGAGTTTCCGA 100
.||.||.|||||.|||.|.||||||||||||.||.||||.||.||.||||
BL03017___glv 48 TACCCCGGGGATTGTATTGATGCTCTTGGACAATCTGGATGATTTCCCGA 97
BSNT_01360___ 101 TCAGAAAGCTGAAGCTGTATGATAATGATAAGGAGA--GACAGGATCGAA 148
||.||.|||||||..|||||||.|||||| ||||| |.||.||...||
BL03017___glv 98 TCCGACAGCTGAAATTGTATGACAATGAT--GGAGAGCGGCAAGACAAAA 145
BSNT_01360___ 149 TTGCAGGCGCCTGTGACGTTTTTATCAGAGAAAAAGCGCCGGATATGGAA 198
|.||.|||||||||||.||.||..|.|.|||||.|||.|||.||||..||
BL03017___glv 146 TAGCCGGCGCCTGTGAAGTGTTGGTTAAAGAAAGAGCTCCGCATATTCAA 195
BSNT_01360___ 199 TTTGCAGCGACGACTGACCCGGAAGAAGCTTTTACAGATGTCGATTTTGT 248
|||..|||||||||.||.||||||||.||.|||.|.|||||.|||||.||
BL03017___glv 196 TTTTTAGCGACGACCGATCCGGAAGAGGCGTTTTCCGATGTTGATTTCGT 245
BSNT_01360___ 249 TATGGCGCACATCAGAGTAGGGAAATACGCGATGCGTGCGCTTGATGAGC 298
.|||||.||.||||||||.||.|||||.||.|||||||.|||.|||||..
BL03017___glv 246 CATGGCTCATATCAGAGTCGGTAAATATGCAATGCGTGAGCTCGATGAAA 295
BSNT_01360___ 299 AAATTCCGTTAAAGTACGGAGTTGTCGGCCAGGAGACGTGCGGGCCGGGC 348
|.||.||..|.||.||||||||.||||||||||||||||||||.||.||.
BL03017___glv 296 AGATCCCTCTGAAATACGGAGTCGTCGGCCAGGAGACGTGCGGACCCGGA 345
BSNT_01360___ 349 GGGATCGCATACGGTATGCGTTCGATCGGCGGTGTGCTTGAAAT-ATTAG 397
|||||.||.|||||.|||.|.|||||.|||||.||||||||..| ||| |
BL03017___glv 346 GGGATTGCGTACGGAATGAGGTCGATTGGCGGCGTGCTTGAGCTCATT-G 394
BSNT_01360___ 398 ATTACATGGAAAAATACTCGCCTGATGCGTGGATGCTCAATTATTCCAAT 447
||||.|||||||..||.||||||||.|||||||||||.||.|||||.||.
BL03017___glv 395 ATTATATGGAAACCTATTCGCCTGACGCGTGGATGCTGAACTATTCAAAC 444
BSNT_01360___ 448 CCGGCGGCAATTGTGGCTGAAGCTACGAGACGCCTTAAACCGAATTCTAA 497
|||||.|||||.||.||.|||||.||.|||.|.||....||||..||.||
BL03017___glv 445 CCGGCTGCAATCGTCGCCGAAGCGACAAGAAGGCTGCGGCCGACATCAAA 494
BSNT_01360___ 498 AATTCTCAATATCTGTGATATGCCGGTTGGGATCGAAGACCGGATGGCGC 547
|.|.||.||.||.||.|||||||||.|.||.|||||||||.|||||||.|
BL03017___glv 495 AGTGCTGAACATTTGCGATATGCCGATCGGTATCGAAGACAGGATGGCTC 544
BSNT_01360___ 548 AAATTCTTGGCTTATCCTCAAGAAAAGAAATGAAGGTCCGCTATTACGGA 597
|.|||||.||..|.||.||..|.||.||.|||...||||||||||||||.
BL03017___glv 545 AGATTCTCGGACTGTCTTCGCGGAAGGAGATGGTTGTCCGCTATTACGGC 594
BSNT_01360___ 598 TTAAATCACTTCGGCTGGTGGACATCAATTCAGGATCAAGAGGGCAACGA 647
.|.|||||.||.|||||||||||.||||||...|||.||||.||||||||
BL03017___glv 595 CTTAATCATTTTGGCTGGTGGACGTCAATTTGTGATAAAGACGGCAACGA 644
BSNT_01360___ 648 TTTAATGCCGAAGCTGAAGGAGCATGTATCTCA----ATACGGCTATATT 693
|.|.||||||..|.|.||.||||||| ||| .|.||||||||||
BL03017___glv 645 TCTGATGCCGGCGATCAAAGAGCATG----TCAGGAGGTTCGGCTATATT 690
BSNT_01360___ 694 CCGAAAACA-GAGGCTGAAGCGGTGGAAGCGAGCTGGAATGACACATTCG 742
||| .|||| |||..||||..||..||.|||||||||||||||||.|||.
BL03017___glv 691 CCG-GAACAGGAGCATGAAAAGGCTGAGGCGAGCTGGAATGACACGTTCA 739
BSNT_01360___ 743 CCAAAGCGCGTGACG----TGCAGGCCGCAGATCCTGATACACTGCCGAA 788
..||||||||.||.| ||.|..| ||||||||.||.||.||.||
BL03017___glv 740 AAAAAGCGCGGGAAGTATTTGAACTC----GATCCTGAGACGCTTCCAAA 785
BSNT_01360___ 789 TACGTATTTGCAATATTATTTGTTCCCGGATGATATGGTGAAAAAATCAA 838
|||||||||||||||||||||.|..||.||||||||||||||||||||||
BL03017___glv 786 TACGTATTTGCAATATTATTTTTATCCTGATGATATGGTGAAAAAATCAA 835
BSNT_01360___ 839 ATCC-GAATCATACGCGGGCAAATGAAGTGATGGAAGGGCGCGAAGCTTT 887
|.|| |||| .|||.|||||.||.|||||.|||||||||||.||....||
BL03017___glv 836 ACCCTGAAT-TTACCCGGGCGAACGAAGTAATGGAAGGGCGGGAGAAATT 884
BSNT_01360___ 888 TATTTTCAGCCAATGTGACATGATTACACGTGAGCAGTCCA----CAGAA 933
.||||||.||.|.|||||.|..||..||...|..||.|||| |.|
BL03017___glv 885 CATTTTCGGCGAGTGTGAAAAAATCGCAAAAGCCCAATCCAGCGCCGG-- 932
BSNT_01360___ 934 AACAGCGAAATCAAAATCGATGACCACGCATCATATATCGTTGATCTTGC 983
||||.|||||.||||.|||||.||.||.||||||||.||.||.|||||
BL03017___glv 933 --CAGCAAAATCGAAATTGATGATCATGCTTCATATATTGTCGACCTTGC 980
BSNT_01360___ 984 CCGGGCGATTGCCTACAACACAGGTGAAAGAATGCTGTTGATCGTTGAAA 1033
.||.||..||||.|.|||.||.||||||.|.|||||.||.||||||||||
BL03017___glv 981 GCGCGCCCTTGCATTCAATACCGGTGAACGGATGCTTTTAATCGTTGAAA 1030
BSNT_01360___ 1034 ATAACGGCGCAATTGCGAACTTTGACCCGACTGCGATGGTCGAGGTGCCA 1083
|||||||.||.||....|||||.||..|..|.||||||||.||||||||.
BL03017___glv 1031 ATAACGGAGCGATCCAAAACTTCGATTCATCGGCGATGGTAGAGGTGCCT 1080
BSNT_01360___ 1084 TGCATTGTCGGCTCAAATGGGCCTGAACCGATTACCGTCGGCACCATTCC 1133
||||||||||||...||.||.||.||.|||||.||..||||||..||.||
BL03017___glv 1081 TGCATTGTCGGCAAGAACGGTCCGGAGCCGATCACAATCGGCAAAATACC 1130
BSNT_01360___ 1134 GCAATTCCAAAAAGGGCTTATGGAGCAGCAGGTATCCGTTGAGAAGC-TG 1182
|||.||||||||||||||.|||||.||||||||.||.|||||.|||| ||
BL03017___glv 1131 GCAGTTCCAAAAAGGGCTGATGGAACAGCAGGTGTCGGTTGAAAAGCTTG 1180
BSNT_01360___ 1183 ACTGTTGAAGCGTGGGCGGAGAAATCGTTCCAAAAGCTGTGGCAGGCGCT 1232
.| ||||||||.|||...||.|||||||..||||||||.||||||||.||
BL03017___glv 1181 TC-GTTGAAGCCTGGATTGAAAAATCGTATCAAAAGCTTTGGCAGGCTCT 1229
BSNT_01360___ 1233 AATTTTGTCAAAAACAGTGCCGAACGCGCGTGTGGCAAGACTCATTCTCG 1282
.||||||||....||.||||||||.||.||....||.|.|||.|||||||
BL03017___glv 1230 GATTTTGTCGCGGACTGTGCCGAATGCACGAACAGCCAAACTGATTCTCG 1279
BSNT_01360___ 1283 AGGATTTAATGGAGGCCAACAAAGACTTCTGGCCTGAGCTTGATC----- 1327
|.|||.|.||.||.||.|||||||.||..|||||.||||| .||
BL03017___glv 1280 ATGATCTGATTGAAGCGAACAAAGGCTATTGGCCGGAGCT--CTCCGCGG 1327
BSNT_01360___ 1328 -AAAGC-----CCGACCCGTATATCATAA 1350
|||.| |||.|.|.| |||
BL03017___glv 1328 AAAATCTTCAGCCGTCGCTT------TAA 1350
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