Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01418 and BL03033
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence dna-align/BSNT_01418___yfhH.1.5803.seq
# -bsequence dna-align/BL03033___yfhH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01418___yfhH-BL03033___yfhH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01418___yfhH-BL03033___yfhH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01418___yfhH
# 2: BL03033___yfhH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 337
# Identity: 228/337 (67.7%)
# Similarity: 228/337 (67.7%)
# Gaps: 44/337 (13.1%)
# Score: 725.0
#
#
#=======================================
BSNT_01418___ 1 ATGGAGAAACGATACAGTCAAATGACACCTCACGAACT-CAATACC--GA 47
|||||||||.||||||||.|||||||..|.|||||||| | ||| ||
BL03033___yfh 1 ATGGAGAAAAGATACAGTGAAATGACTGCACACGAACTGC---ACCAGGA 47
BSNT_01418___ 48 AATCGCATTACTTTCTGAAAAAGCAAGAAAAGCCGAACAGCAT-GGAATC 96
|||.||....||..|.|||||.|||||||||||.||||| .|| ||.||.
BL03033___yfh 48 AATTGCGGGTCTGACCGAAAAGGCAAGAAAAGCAGAACA-AATGGGGATT 96
BSNT_01418___ 97 ATAAACGAACTGGCAGTGCTCGAACGGAAAATTACGATGGCAAAAGCATA 146
.|.||.||||||||.||.|.||||||||||||..|||||||.|||||.||
BL03033___yfh 97 GTGAATGAACTGGCCGTTCACGAACGGAAAATCGCGATGGCGAAAGCCTA 146
BSNT_01418___ 147 TTTGCTGAACCCGGAAGATTACTCA---CCGGGA--------GAAACATA 185
..|.||..|.||||..|||| |.| ||||.| ||||
BL03033___yfh 147 CCTTCTTGATCCGGCCGATT--TTAAAGCCGGCAACGTATACGAAA---- 190
BSNT_01418___ 186 TCGTGTGGAAAACACTGAGGACGA-GTTTACC--ATCAGTTATTTAAATG 232
|.|||.| ||.||.||| |.||.|| |||.|.||||||||.|
BL03033___yfh 191 -----TCGAAGA---TGGGGGCGACGATTTCCATATCCGCTATTTAAACG 232
BSNT_01418___ 233 GCGTTTTCGCATGGGGATACAGGACCTCT----TCCCCCCAGCAAGAGGA 278
||||.|||||.||||||||| |.||| ||.||..|.||.||.||
BL03033___yfh 233 GCGTATTCGCCTGGGGATAC----CGTCTTTCGTCACCGGATCATGAAGA 278
BSNT_01418___ 279 AGCTCTGCCAATCTCAGTATTGCAAGAAAAAGAATAA 315
.|||||||||||.||..||||..|||||||.|..|||
BL03033___yfh 279 GGCTCTGCCAATTTCTTTATTAAAAGAAAAGGGCTAA 315
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