Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01435 and BL03058
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:57
# Commandline: needle
# -asequence dna-align/BSNT_01435___yfhS.1.5803.seq
# -bsequence dna-align/BL03058___yfhS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01435___yfhS-BL03058___yfhS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01435___yfhS-BL03058___yfhS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01435___yfhS
# 2: BL03058___yfhS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity: 156/240 (65.0%)
# Similarity: 156/240 (65.0%)
# Gaps: 30/240 (12.5%)
# Score: 482.5
#
#
#=======================================
BSNT_01435___ 1 ATGTATGTCGGACGTGATATGAGCGA-ATTGA--ACATGGTTTCC-AAAA 46
|||||.||.|||||.||||||||||| .|.|| |||.| || ||||
BL03058___yfh 1 ATGTACGTAGGACGCGATATGAGCGAGCTCGACCACACG----CCGAAAA 46
BSNT_01435___ 47 AAGATTGGAA-------GAACAGTGAACTCGCT----TATTTTCATCATG 85
|.||.||||| || ||| ||||||||.|..|
BL03058___yfh 47 ACGAGTGGAAAGATGCGGA-----------GCTTCTCTATTTTCACCGCG 85
BSNT_01435___ 86 CCTTTCAGCAAATTATGCCTTATTTGAACGAAGAAGGCCAATCAAAATAC 135
||||.||||||||.|||||.|.|.|.||.||||||||.||..|..|.|||
BL03058___yfh 86 CCTTCCAGCAAATCATGCCATTTCTCAATGAAGAAGGGCATGCCGAGTAC 135
BSNT_01435___ 136 CGGGAATTAACGCAAGAAATTGAAGCGCGCGGCGGAATGAAGCGCAATGA 185
|.|||..|...|.||||||||.||||..|.||||||.||...|||.|.||
BL03058___yfh 136 CTGGAGGTTGTGAAAGAAATTCAAGCAAGAGGCGGACTGTGCCGCCAGGA 185
BSNT_01435___ 186 AGCGGACTACAGCCACGGCACGCGCGTCTCTTACGATTAA 225
|||.||.||.|..||||||||...|.||...|||||.|||
BL03058___yfh 186 AGCCGATTATACGCACGGCACCACCATCCAGTACGACTAA 225
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