Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01443 and BL03059

See Amino acid alignment / Visit BSNT_01443 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence dna-align/BSNT_01443___ygaE.1.5803.seq
#    -bsequence dna-align/BL03059___ygaE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01443___ygaE-BL03059___ygaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01443___ygaE-BL03059___ygaE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01443___ygaE
# 2: BL03059___ygaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1095
# Identity:     789/1095 (72.1%)
# Similarity:   789/1095 (72.1%)
# Gaps:          57/1095 ( 5.2%)
# Score: 2740.0
# 
#
#=======================================

BSNT_01443___      1 ATGAAACTTGGTGCCCGCATTTTCAAAACCGGGATTGCGATTACACTTGC     50
                     |||||||||||||||||.|||||||||||.||.|||||.|||||.|||||
BL03059___yga      1 ATGAAACTTGGTGCCCGTATTTTCAAAACAGGCATTGCCATTACGCTTGC     50

BSNT_01443___     51 CCTTTATTTGGCTTCGTGGATCGGGCTTCCCGCGCCGATTTTCGCTGGAA    100
                     .|||||..|.||.||.|||.||||.|||||..|.||..|.|||||.||||
BL03059___yga     51 GCTTTACCTCGCGTCTTGGCTCGGCCTTCCGACTCCTGTCTTCGCGGGAA    100

BSNT_01443___    101 TTGCAGCGATATTTGCGATCCAGCCGTCGATTTACCGCTCTTTTCTCATT    150
                     |.||.||.||.||.|||||||||||.|||||.||.||.||.|||.|.|..
BL03059___yga    101 TCGCGGCTATCTTCGCGATCCAGCCTTCGATCTATCGTTCATTTTTGACG    150

BSNT_01443___    151 ATTATTGACCAGGTTCAAGCAAATATCATCGGAGCTGTGATTGCCACAG-    199
                     |||.|.||.||.||.||.||.||.||.||||||||      .||||||| 
BL03059___yga    151 ATTGTCGATCAAGTGCAGGCGAACATTATCGGAGC------AGCCACAGC    194

BSNT_01443___    200 -----TGTTCGGCCTTATTTTCGGACCCAGCCCGATTATGATCGGGTTAA    244
                          |.||.||.||||||||.|.||||||.|||||.||.|||||.||.|
BL03059___yga    195 CATTATTTTTGGACTTATTTTTGAACCCAGTCCGATCATCATCGGATTGA    244

BSNT_01443___    245 CAGCAGTTATTGTCATTACAATCATGCTGAAACTTAAAATTGAACATACA    294
                     |.||.||.||.||||||||.||||...||||.||.||.||.||..|.||.
BL03059___yga    245 CGGCGGTAATCGTCATTACGATCAACTTGAAGCTGAAGATCGAGAACACG    294

BSNT_01443___    295 ATTTCAATTGCTCTTGTAACAGTTATTGCGATATTAGAATCCGCCGGTGA    344
                     |||||.||.||||||||.||.||||||||.|||.|.||...|.||||.||
BL03059___yga    295 ATTTCGATCGCTCTTGTCACCGTTATTGCCATACTGGAGAGCTCCGGCGA    344

BSNT_01443___    345 CGACTTTTTAATGTTCGCGCTGATCAGAACAAGCACAGTCATCTTAGGGG    394
                     |.||||||||..|||.||..||.|.|||||..|.||.||.||.||.||.|
BL03059___yga    345 CAACTTTTTATGGTTTGCTTTGGTGAGAACCGGAACGGTTATTTTGGGCG    394

BSNT_01443___    395 TGCTTTCTTCCTTTATCGTCAACCTTGTGTTTTTGCCTCCTAAGTACGAA    444
                     ||.|.|||.|.||..|.||||||||..|.|||.||||.|||||.||.|||
BL03059___yga    395 TGTTGTCTGCGTTCTTGGTCAACCTGATTTTTCTGCCGCCTAAATATGAA    444

BSNT_01443___    445 ACAAAGC---TGATTCATAATACCGTCGAAAACACCGAAGAAATTATGAA    491
                     ||.||||   |.|..||||.|   ||.|||||.||.||.|||.|.||.||
BL03059___yga    445 ACGAAGCTCGTCAGCCATATT---GTTGAAAATACAGATGAAGTCATTAA    491

BSNT_01443___    492 GTGGATCAGATTGTCCATGCGGCAGTCGACAGAGCATTCGATTTTGAAAG    541
                     .|||||||||||||..|.||||.||.|.||.||.|||||.||..||||||
BL03059___yga    492 ATGGATCAGATTGTTGACGCGGAAGACAACGGAACATTCCATGCTGAAAG    541

BSNT_01443___    542 AGGATATTGAAAAACTGAAAGAAAAAATGATCAAGCTTGATCAGACATAT    591
                     |.||.||||||||||||||||||||||||||.|||.||||.|  ||.|.|
BL03059___yga    542 AAGACATTGAAAAACTGAAAGAAAAAATGATGAAGGTTGACC--ACCTTT    589

BSNT_01443___    592 -CTT-CTATATAAAGAAGAAAGAAGTTACTTTAAGAAAACG----ACTTA    635
                      ||| ||.||.||||||||||||||.||.||    ||||||    ||.||
BL03059___yga    590 ACTTGCTCTACAAAGAAGAAAGAAGCTATTT----AAAACGTTCCACATA    635

BSNT_01443___    636 TGTGAAATCA-AGAAAGCTTGTCCTGTTCAGACAGGCCATTATTACTGCA    684
                     ||| |||.|| .|||||||.||.||||||||||||||.||.|||.|..|.
BL03059___yga    636 TGT-AAAACAGCGAAAGCTCGTGCTGTTCAGACAGGCGATCATTGCATCC    684

BSNT_01443___    685 AATCGGGCGCTTGATACATTGAAGAAGCTGCATCGTCTGGAAAACGAGAT    734
                     ||.||.|||||||||.|..||||.||||||||.||.||.|||||||||.|
BL03059___yga    685 AACCGTGCGCTTGATGCCCTGAAAAAGCTGCACCGGCTTGAAAACGAGTT    734

BSNT_01443___    735 CTATCATATGCCGGAAGAGTTTCAGGAAACACTGACTGAAGAACTTGATT    784
                     .|||||.|||||.|||||.|||||.|||||.|||...|||||.||.||||
BL03059___yga    735 TTATCACATGCCTGAAGAATTTCAAGAAACGCTGGTCGAAGAGCTCGATT    784

BSNT_01443___    785 ACCTGCTTTACTGGCACGAACGGATTTTGATGAGGTTTGTCGGAAAAATC    834
                     |.||.||..|.|||||||||||.|||||.|||||.||.|||||.|..|||
BL03059___yga    785 ATCTCCTCCATTGGCACGAACGAATTTTAATGAGATTCGTCGGCAGGATC    834

BSNT_01443___    835 AAGCCGCATGATGACGCGGTT----------GAAGAAGGCATCCAGTATA    874
                     ||..||||.|||.|||    |          ||||||||...|..|||.|
BL03059___yga    835 AAAACGCAGGATCACG----TCGACCTGCACGAAGAAGGAGACGTGTACA    880

BSNT_01443___    875 AGCAGCTTTTAACAAAGTCATTTTTAAAAAATCAG--CAAAATACGGATG    922
                     |.||||..||.||..|.|||||..|.|||||.|||  ||||.||  .|.|
BL03059___yga    881 AACAGCACTTGACCGAATCATTCCTGAAAAACCAGGACAAATTA--AAAG    928

BSNT_01443___    923 AGGAGCTTATTGATTACAACATGCTCAATATTATGGCAAGCGCCGTGGAA    972
                     |.||.||..|.||.|||||.|||||.|..||||||||.|||.|.||.|||
BL03059___yga    929 AAGAACTGTTGGACTACAATATGCTGACCATTATGGCGAGCACTGTAGAA    978

BSNT_01443___    973 TATCGCGAGCAGCTTGAACATTTAGAAACACTT-ATCACAAGTTTTCAAA   1021
                     ||.||.||.||||||||.|||||.||||| ||| .||.||||.|||||.|
BL03059___yga    979 TACCGAGAACAGCTTGAGCATTTGGAAAC-CTTGCTCTCAAGCTTTCAGA   1027

BSNT_01443___   1022 CGTATCATCCGAAAGACTGCGAAATAGAA----ACAGAAGAGTAA   1062
                     ||||.||....||||||.||||..|.|||    | .|||||.|||
BL03059___yga   1028 CGTACCACAAAAAAGACAGCGAGCTTGAAGTTGA-GGAAGAATAA   1071


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