Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01444 and BL03060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:58
# Commandline: needle
# -asequence dna-align/BSNT_01444___gsaB.1.5803.seq
# -bsequence dna-align/BL03060___gsaB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01444___gsaB-BL03060___gsaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01444___gsaB-BL03060___gsaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01444___gsaB
# 2: BL03060___gsaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1317
# Identity: 1014/1317 (77.0%)
# Similarity: 1014/1317 (77.0%)
# Gaps: 45/1317 ( 3.4%)
# Score: 3895.5
#
#
#=======================================
BSNT_01444___ 1 ---TTGCATACAAAATCAAT-TGAA---CTTCACAATGAGGCATTACAGC 43
..|||||| ||||| |||| |||||..|.||.||..|.||.|
BL03060___gsa 1 ATGCAGCATAC----TCAATCTGAAAAGCTTCATGAAGAAGCTCTTCAAC 46
BSNT_01444___ 44 ACATTGTCGGCGGTGTAAACAGCCCGTCTAGATCATATAAAGCAGTCGGC 93
|.||.|||||.||.||.||||||||.||.||.||.||.|||||.||||||
BL03060___gsa 47 ATATAGTCGGAGGCGTCAACAGCCCCTCAAGGTCTTACAAAGCGGTCGGC 96
BSNT_01444___ 94 GGCGGTTCTCCTGTTGCAATGGAGAAAGCAAGCGGCGCTTATTTTTGGGA 143
||.||||||||.||.||.|||||.|..|.|||||||||||||||||||||
BL03060___gsa 97 GGAGGTTCTCCCGTCGCGATGGAAAGGGGAAGCGGCGCTTATTTTTGGGA 146
BSNT_01444___ 144 TGTGGACGGCAACAAATACATCGATTATTTAGCGGCGTACGGTCCGATTA 193
|||||||||||||||||||||.||.||..|.||.||||||||.|||||||
BL03060___gsa 147 TGTGGACGGCAACAAATACATAGACTACCTTGCCGCGTACGGACCGATTA 196
BSNT_01444___ 194 TTACAGGACATGCCCACCCGCATATTACAGAAGCGATTAAAAAAGCGGCA 243
||||.||.||.||||||||||||||.||..||||||||.|||.|||.||.
BL03060___gsa 197 TTACGGGCCACGCCCACCCGCATATCACGAAAGCGATTCAAACAGCTGCT 246
BSNT_01444___ 244 GAGAACGGTGTATTGTATGGAACACCAACGAAACACGAGGTTACATTTGC 293
||||||||.||..|.||.||.||.||.||.||.||.||.||.||||||||
BL03060___gsa 247 GAGAACGGGGTGCTTTACGGTACGCCGACAAAGCATGAAGTGACATTTGC 296
BSNT_01444___ 294 AAAGATGCTCAAAGAAGCCATTCCCGCTATGGACAAAGTAAGATTCGTCA 343
.||||||||.||.|||||.|||||.||..||||.|||||.||||||||||
BL03060___gsa 297 CAAGATGCTTAAGGAAGCGATTCCTGCCTTGGATAAAGTGAGATTCGTCA 346
BSNT_01444___ 344 ATTCGGGTACAGAAGCCGTTATGACGACCATCCGCGTGGCTCGCGCATAT 393
|||||||.||.|||||.||.||||||||.||.|||||.||.||.||.|||
BL03060___gsa 347 ATTCGGGAACGGAAGCTGTGATGACGACGATTCGCGTCGCCCGGGCCTAT 396
BSNT_01444___ 394 ACAGGCCGGACAAAAATCATTAAATTTGCGGGCTGTTATCACGGGCATTC 443
||||||.|.||.||||||||.||.||.||.|||||.||.|||||.|||||
BL03060___gsa 397 ACAGGCAGAACGAAAATCATCAAGTTCGCCGGCTGCTACCACGGCCATTC 446
BSNT_01444___ 444 GGACCTTGTGCTTGTCGCCGCAGGCTCCGGCCCGTCTACTCTTGGCACAC 493
.||.||||||||.||.||.||.||.||.||.|||||.||.||.|||||.|
BL03060___gsa 447 CGATCTTGTGCTGGTGGCGGCCGGTTCAGGACCGTCAACGCTCGGCACGC 496
BSNT_01444___ 494 CAGACTCAGCCGGTGTACCGAAAAGCATTGCAAACGAAGTGATCACAGTA 543
|.||.||.|||||.||.||.||||||||.||.|||||.|||||.||.||.
BL03060___gsa 497 CTGATTCCGCCGGGGTTCCAAAAAGCATCGCCAACGAGGTGATTACCGTT 546
BSNT_01444___ 544 CCATTTAATGATATCAATAGCTATAAAGCGGCTCTTGATAAATGGGGCAG 593
||.||.|||||||||.|.||||||||||..||.||.|||||||||||.|.
BL03060___gsa 547 CCTTTCAATGATATCGACAGCTATAAAGAAGCGCTCGATAAATGGGGGAA 596
BSNT_01444___ 594 TGAAATCGCGGCGGTTCTCGTTGAACCGATTGTCGGCAACTTCGGTATCG 643
.||.||.|||||.||.||||||||||||||||||||.||||||||.||||
BL03060___gsa 597 CGATATTGCGGCAGTCCTCGTTGAACCGATTGTCGGAAACTTCGGGATCG 646
BSNT_01444___ 644 TGGAGCCGAAAGAG-GGCTTCTTAGAAAAAGTAAATGAATTGACACATAA 692
|.||.||| ||||| ||.|||.|.||..|.||.||||||.|.||.|||||
BL03060___gsa 647 TCGAACCG-AAGAGCGGATTCCTCGAGCAGGTCAATGAACTTACGCATAA 695
BSNT_01444___ 693 TGCAGGCGCTCTCGTTATTTACGATGAAGTCATTACGGCTTTCCGCTTTA 742
.||.||.||.||.||.||.|||||||||||||||||.|||||||||||||
BL03060___gsa 696 CGCGGGAGCCCTGGTCATCTACGATGAAGTCATTACCGCTTTCCGCTTTA 745
BSNT_01444___ 743 TGTATGGCGGCGCGCAGGATC-TCTTACAG--GTGAAACCAGATTTAACA 789
||||.||||||||.||||||| |||| | ||.|||||.|||||.||.
BL03060___gsa 746 TGTACGGCGGCGCCCAGGATCTTCTT---GGCGTCAAACCTGATTTGACG 792
BSNT_01444___ 790 GCACTCGGGAAAATTATCGGCGGCGGACTTCCGATTGGCGCCTATGGCGG 839
||.|||||.|||||.|||||||||||.||.|||||.||||||||.||.||
BL03060___gsa 793 GCGCTCGGCAAAATCATCGGCGGCGGCCTGCCGATCGGCGCCTACGGAGG 842
BSNT_01444___ 840 CAAACAAGAAATCATGGAGCAGGTAGCTCCGCTAGGACCTGCTTATCAGG 889
||.|.||||.||.|||||.||.||.||.|||||.||||||||||||||.|
BL03060___gsa 843 CAGAAAAGAGATTATGGAACAAGTCGCACCGCTCGGACCTGCTTATCAAG 892
BSNT_01444___ 890 CAGGAACAATGGCAGGGAACCCCGCTTCCATCCTATCAGGCATCGCTTGT 939
|.||.||.|||||.|||||.||.|||||||||||.||.||||||||.||.
BL03060___gsa 893 CGGGCACGATGGCGGGGAATCCGGCTTCCATCCTCTCTGGCATCGCCTGC 942
BSNT_01444___ 940 CTGGAAGTGCTCAAAGAAAAAGGCGTGTATGAAAAGCTTGATCACCTTGG 989
||.||||||||.||||||||||||...||.|||||.|||||.|.|||.||
BL03060___gsa 943 CTTGAAGTGCTGAAAGAAAAAGGCACATACGAAAAACTTGACCGCCTCGG 992
BSNT_01444___ 990 CGCTATGCTTGAGGAAGGTATTTTGAAGCAC--GCAGAAACACACGGCAT 1037
|||.||||||||.|||||.||..|| |||| ||.||.||.||||||||
BL03060___gsa 993 CGCCATGCTTGAAGAAGGCATCCTG--GCACATGCCGAGACCCACGGCAT 1040
BSNT_01444___ 1038 CACCATTACGGTCAACCGGTTAAAAGGTGCGCTCACGGTATATTTCTCTG 1087
|..|||.||.||||||||..|||||||.||||||||.|||||.|||.|..
BL03060___gsa 1041 CGACATCACTGTCAACCGTCTAAAAGGCGCGCTCACCGTATACTTCACGA 1090
BSNT_01444___ 1088 ATGAGAAAGTGGAAAATTACGAGCAGGCTGA----ACGGAGTGACGGAGA 1133
|.||.|||||.|||||.||.|||||.||.|| ||| ||||||||
BL03060___gsa 1091 ACGAAAAAGTCGAAAACTATGAGCAAGCCGAAAATACG----GACGGAGA 1136
BSNT_01444___ 1134 AACATTCGCTACGTTTTTTAAGCTGATGCTGGAACGCGGAATTAATTTAG 1183
.|..|||||..|.|||||.||.||||||||.||.||||||||.|||.|.|
BL03060___gsa 1137 CATGTTCGCGGCCTTTTTCAAACTGATGCTTGAGCGCGGAATCAATCTTG 1186
BSNT_01444___ 1184 CACCTTCTAAGTATGAAGCTTGGTTTATTACCACAGCACATACAGAGCAG 1233
|.|||||.||.||||||||.||||||||.|||||.||.||.||.||..||
BL03060___gsa 1187 CGCCTTCAAAATATGAAGCATGGTTTATCACCACCGCGCACACGGAAGAG 1236
BSNT_01444___ 1234 GATATTAAAGACACGCTTGCAGCGGTCGAGGATGCATTTAAACATCTAAA 1283
||.||||||||.|||||...|||.||.||.||..||||||||||..|.||
BL03060___gsa 1237 GACATTAAAGATACGCTCAAAGCCGTGGATGACTCATTTAAACAATTGAA 1286
BSNT_01444___ 1284 A----------AACTAG 1290
| ||
BL03060___gsa 1287 ACAGCGCATGTAA---- 1299
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