Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01294 and BL03066
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:48
# Commandline: needle
# -asequence dna-align/BSNT_01294.1.5803.seq
# -bsequence dna-align/BL03066.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01294-BL03066.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01294-BL03066.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01294
# 2: BL03066
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 409
# Identity: 281/409 (68.7%)
# Similarity: 281/409 (68.7%)
# Gaps: 35/409 ( 8.6%)
# Score: 903.0
#
#
#=======================================
BSNT_01294 1 ATGATGGATTTTTCCCATATTGTGTCTGAAGATAAAATTAAGCGCGCCAT 50
|||||||||||....||.||.||||||||.||.|||||||..|||||
BL03066 1 ---ATGGATTTTTCGAGCATCGTTTCTGAAGACAAGATTAAGCAGGCCAT 47
BSNT_01294 51 CAAAGACGGGGACTTTCAAAACCTCCCGGGAATGGGGAAGCCGCTGCCGA 100
.||.|||||.||.||..||...||.||||||||||||||.||..||...|
BL03066 48 TAAGGACGGCGAATTCGAAGGGCTTCCGGGAATGGGGAAACCTTTGAAAA 97
BSNT_01294 101 AGGATGACGCGGCACACTTGCCGGA--ATCGCTGCGCATGGGCTATCGTA 148
|.||.||.||.||.||..|.||.|| || ||.|||||||..||..|..
BL03066 98 AAGACGATGCCGCCCATGTTCCAGAGCAT--CTCCGCATGGCTTACAGAG 145
BSNT_01294 149 TTTTGAAAAACGCGGGAATGGCAGAGGACGAGGGCGCGCTCAAAAAAGAG 198
|..||||||||||.||||||||.|.|||.||.|||||..|.||.|||||.
BL03066 146 TGATGAAAAACGCCGGAATGGCGGGGGATGAAGGCGCTTTAAAGAAAGAA 195
BSNT_01294 199 CTTATGACCATCGACCATTTAATCGAAAAGTGCTATGACGAAAAAGAACG 248
||.|||||.||.|||.|.|||||||.|||||||...||.|||.|.||.||
BL03066 196 CTGATGACGATTGACGACTTAATCGCAAAGTGCGCGGATGAAGACGAGCG 245
BSNT_01294 249 CGAGCAATTAA-TCAGAAAAAAATCTGAAAAGCAATTGCT---GCTTGAT 294
|||||..|||| |.|||.||||| |.||||..| .||| |||.||.
BL03066 246 CGAGCGTTTAATTGAGAGAAAAA-CAGAAACCC---GGCTCAGGCTCGAC 291
BSNT_01294 295 AAGCTTGTCGACAAAAAAGGCATGTTTTCAAAGCCAGCATCCGCTTTTTA 344
|.|||.|.|||||||||||||||||||||.|||||.||.||.||.|||||
BL03066 292 AGGCTCGCCGACAAAAAAGGCATGTTTTCCAAGCCTGCCTCAGCGTTTTA 341
BSNT_01294 345 T-AAGAATAAAGTATATGACC---GGCTTGGACGAAACAGACCTTCTTCC 390
| ||||| |||||.| ||| ||||..|..||||.|.|
BL03066 342 TAAAGAA-AAAGTGT---ACCGAAGGCTGAGCGGAAATAAA--------- 378
BSNT_01294 391 A---GCTGA 396
| |||.|
BL03066 379 AAGCGCTAA 387
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