Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01337 and BL03090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:51
# Commandline: needle
# -asequence dna-align/BSNT_01337___yfjP.1.5803.seq
# -bsequence dna-align/BL03090___yfjP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01337___yfjP-BL03090___yfjP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01337___yfjP-BL03090___yfjP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01337___yfjP
# 2: BL03090___yfjP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 901
# Identity: 649/901 (72.0%)
# Similarity: 649/901 (72.0%)
# Gaps: 74/901 ( 8.2%)
# Score: 2258.5
#
#
#=======================================
BSNT_01337___ 1 ATGTGGAAGGAAAAAGTATCTGTCACGCCTCCGTATCATTTTGACCGCGT 50
|||||||||||||..|||...||.||.||.||.|||||||||||||||||
BL03090___yfj 1 ATGTGGAAGGAAACTGTAAGCGTAACACCGCCTTATCATTTTGACCGCGT 50
BSNT_01337___ 51 GCTGGACAGGCTGTCTTTAGACCCCCTCAATGCTGTTGA--TCGAGAGGC 98
|.||||||||||.||..|.||.||.||||||||.||..| ||||.| .
BL03090___yfj 51 GTTGGACAGGCTTTCGCTTGATCCGCTCAATGCGGTCAACCTCGACA--A 98
BSNT_01337___ 99 AAGGGAAGTCCGTGTGC-------CAATCAGAAATCAAG-----CGGGGG 136
||||||.|||....||| |||||| |||..||| ||||
BL03090___yfj 99 AAGGGAGGTCAAGCTGCCGCTCCGCAATCA-AAACAAAGAGCCTCGGG-- 145
BSNT_01337___ 137 ACGTATGTATTGTAAAGGTACAAGCGTTAGGACATGCGGGCGATCCTGAG 186
||||....||.||.|||...|||..|||.|..|..||.|.|
BL03090___yfj 146 ---------TTGTCGCTGTGCAGGCGACGGGAACTGCTGAAGCCCCGGCG 186
BSNT_01337___ 187 TTCCTCGTCAGCGGGGAA---ACGGATCAGGGA-GAAATGATGAAGGAAA 232
||...||||||| |||| || |||| |.|| ||.|||||.||.|||.
BL03090___yfj 187 TTTGCCGTCAGC--GGAATAGAC-GATC-GAGATGACATGATAAAAGAAG 232
BSNT_01337___ 233 TCAAGCGGATTTTTCA-ATGGGAAAATCATTTGCAGCACGTTCTGGATCA 281
|.||.|||| |.|||| |||||||.|...|.|.||||..||.||||||||
BL03090___yfj 233 TGAAACGGA-TCTTCAGATGGGAAGAAAGTCTTCAGCCTGTACTGGATCA 281
BSNT_01337___ 282 TTTTTCAAAAACGAGCCTGTCCGCTATTTTTGAAGAGCATGCCGGGACGC 331
.||||||.||.|.|||||.||..|.||||||||.|||||||||||.||||
BL03090___yfj 282 CTTTTCACAATCAAGCCTATCATCGATTTTTGAGGAGCATGCCGGAACGC 331
BSNT_01337___ 332 CGCTTGTTCTGGA-CTACAGCGTGTACAACTGCATGATGAAATGCATTAT 380
||||.||.||.|| .|.|| ..||||..|.|||.||||||||||||||||
BL03090___yfj 332 CGCTGGTGCTCGATTTTCA-TTTGTATCATTGCCTGATGAAATGCATTAT 380
BSNT_01337___ 381 CCACCAGCAGCTCAATCTTTCCTTCGCTTACACGCTAACAGAACGGTTTG 430
||||||||||||.||.||.||.||.|||||.|||||.||.||.|||||.|
BL03090___yfj 381 CCACCAGCAGCTGAACCTGTCTTTTGCTTATACGCTCACGGAGCGGTTCG 430
BSNT_01337___ 431 TTCATGCGTTTGGCGAGCAGAAGGATGGCGTGTGGT-------GCTACCC 473
||||..|.|||||.|||||.|||||.||.||.|||| |||.|||
BL03090___yfj 431 TTCACACTTTTGGAGAGCAAAAGGACGGGGTCTGGTTTTATCCGCTTCCC 480
BSNT_01337___ 474 AAAGCCGGAAACGATTGCAGAACTCGATTATCAGGATCTGCGTGATCTGC 523
||||||||||||.|.||.||.||..|.||||||||.||.||.|
BL03090___yfj 481 -------GAAACGATTGCACAGCTTGACTACAACGATCTGCGCGAACTTC 523
BSNT_01337___ 524 AATTCAGCATGAGAAAAGCGGAATACACCATTGATACATCAAGGATGATC 573
|||||||||||.||||.||.|||||...|||.||||||||||||||||||
BL03090___yfj 524 AATTCAGCATGCGAAAGGCTGAATATGTCATCGATACATCAAGGATGATC 573
BSNT_01337___ 574 GCAGAAGGCACACTCAG--CTTGTCA-GAGCTGCCGCA--TATGGCGGAT 618
|||||.||| |..|.|| |||| | |||||....|| ||| |.|||
BL03090___yfj 574 GCAGACGGC-CGTTTAGATCTTG--ATGAGCTTGATCAATTAT--CAGAT 618
BSNT_01337___ 619 GAAGACATTATGAAGAAACTGATCAAAATTAGGGGTATCGGCCCGTGGAC 668
|||||.||||||.|.||.|||.|.|||||.||.||.||||||||||||||
BL03090___yfj 619 GAAGATATTATGGAAAAGCTGGTGAAAATCAGAGGAATCGGCCCGTGGAC 668
BSNT_01337___ 669 CGTGCAAAATATCCTCATGTTCGGACTTGGCCGTCCCAATTTATTCCCGC 718
|||.|||||..|.||..||||||||||.||||||||||||.|.||.|||.
BL03090___yfj 669 CGTCCAAAACGTTCTGCTGTTCGGACTCGGCCGTCCCAATCTGTTTCCGG 718
BSNT_01337___ 719 TTGCCGATATCGGCCTCCAGAATGCCATCAAACGCCATTTTCAGCTGG-- 766
..||||||||||||.||||.|||||||||||||||||||| |||
BL03090___yfj 719 CAGCCGATATCGGCATCCAAAATGCCATCAAACGCCATTT-----TGGCT 763
BSNT_01337___ 767 ---ACGATAAGCCGGCAAAGGATGTCATGCTGGCGATGAGCAAGGAGTGG 813
|||||||.|||.||||.||....|||||.|..||||||||.||.|||
BL03090___yfj 764 TAAACGATAAACCGACAAAAGAACAAATGCTTGAAATGAGCAAAGAATGG 813
BSNT_01337___ 814 GAGCCTTATTTAAGCTATGCGTCTTTGTATTTGTGGAGAAGTATAGAATA 863
.|.|||||||||||||||||.||.||||||||.|||||.||.||.||.||
BL03090___yfj 814 CACCCTTATTTAAGCTATGCTTCCTTGTATTTATGGAGGAGCATCGAGTA 863
BSNT_01337___ 864 A 864
.
BL03090___yfj 864 G 864
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