Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01342 and BL03092
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence dna-align/BSNT_01342___yfjM.1.5803.seq
# -bsequence dna-align/BL03092___yfjM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01342___yfjM-BL03092___yfjM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01342___yfjM-BL03092___yfjM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01342___yfjM
# 2: BL03092___yfjM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 516
# Identity: 322/516 (62.4%)
# Similarity: 322/516 (62.4%)
# Gaps: 99/516 (19.2%)
# Score: 947.5
#
#
#=======================================
BSNT_01342___ 1 ATGAAACGGCTATGCATCATCCCCTGCGGCAAGAAAAAAATCTGGGACGT 50
||||||.|.||.|||||||||||.|||||...|||||||||||||||.||
BL03092___yfj 1 ATGAAAAGACTTTGCATCATCCCGTGCGGGGCGAAAAAAATCTGGGATGT 50
BSNT_01342___ 51 CCAGCCTGATGCCG------GGCCGGTAAG-AGCAGAGGACGCTTATCTC 93
|||| ||| ||||.||..| .|||.||||.|..|||||.
BL03092___yfj 51 ------TGAT-CCGGACATCGGCCCGTCCGCCGCAAAGGATGTCTATCTA 93
BSNT_01342___ 94 AGCCCGTTTCATCAGGCGTGCGAACG---GTATGCGAAAGCATTTTT--C 138
|||||.|||||.|.||||||| || .||||||.|..||||||| |
BL03092___yfj 94 AGCCCATTTCACCGGGCGTGC---CGCGCATATGCGCAGACATTTTTTAC 140
BSNT_01342___ 139 GATGAGTGGGTGATTTTGTCTGCGAAGCACGGGTTCCTCCGCCCTGATGA 188
| ||.|||||||||.|.||.||.||.|||||.||..|....|||||.||
BL03092___yfj 141 G--GATTGGGTGATTCTTTCAGCAAAACACGGTTTTTTAAAACCTGAAGA 188
BSNT_01342___ 189 TCTCGTTTCGGGAAATTACGATGTCACTTTTGGCACCGGTCATCCGGAAA 238
|.|||||.|.|.|||.||.||.|||||.|||||.|...|.||.||.||.|
BL03092___yfj 189 TATCGTTCCTGAAAACTATGACGTCACATTTGGGATGCGCCACCCAGAGA 238
BSNT_01342___ 239 TCATGACAGCGGACGAGCTG-AGCCGCCAATTTCAC-GAAAAAGGCTTTT 286
|.|||.|.|..|.||.|||| ||.|.|.|..|..|| |||||| .
BL03092___yfj 239 TTATGCCGGATGGCGGGCTGAAGGCTCAAGGTGAACGGAAAAA------C 282
BSNT_01342___ 287 CTGAT--AT--CGAAGAGCTAGTCATGCTTGGCGGAAAAAAATATCGAAG 332
||||| || |||.||..|.||||||||.|||||||||||||| .|.|
BL03092___yfj 283 CTGATGGATTGCGATGAAATCGTCATGCTCGGCGGAAAAAAATA--CAGG 330
BSNT_01342___ 333 C--GTTCT---AAACGCCGT----CATCGGAGAACACCAGCATATCA--- 370
| ||.|| .|||| .|| ||.|||| |||||.||||
BL03092___yfj 331 CCTGTACTGAGGAACG-TGTTTGGCAGCGGA------CAGCAGATCATAT 373
BSNT_01342___ 371 ----GCTGGCCGCTATCATCTTACAAAGGCATAGGCTATATGCTCCAAGC 416
||||||.| ..|||...||.||.|||||||||||.||.||
BL03092___yfj 374 ACCCGCTGGCGG-------GATACCGGGGAATCGGCTATATGCTGCAGGC 416
BSNT_01342___ 417 GCTGAACCGGGCTGTTGAAGAA----------------AAGCATG----A 446
||||||.||||||||.||.||| || |||| |
BL03092___yfj 417 GCTGAAGCGGGCTGTCGATGAAGGCCGGGAACTTGGTGAA-CATGAAAAA 465
BSNT_01342___ 447 ACTGTAG--------- 453
|.|| ||
BL03092___yfj 466 AATG-AGTTTTTTTAA 480
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