Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01318 and BL03111

See Amino acid alignment / Visit BSNT_01318 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence dna-align/BSNT_01318___yfkK.1.5803.seq
#    -bsequence dna-align/BL03111___yfkK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01318___yfkK-BL03111___yfkK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01318___yfkK-BL03111___yfkK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01318___yfkK
# 2: BL03111___yfkK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 223
# Identity:     163/223 (73.1%)
# Similarity:   163/223 (73.1%)
# Gaps:          14/223 ( 6.3%)
# Score: 586.0
# 
#
#=======================================

BSNT_01318___      1 TTGTCCAGCCCAAATACAGAAACA-------TTAACTCAAATGATTGAAG     43
                     |||| |||..||||     |||||       |.||| .|||||||.||||
BL03111___yfk      1 TTGT-CAGATCAAA-----AAACAGCCGAGCTGAAC-AAAATGATCGAAG     43

BSNT_01318___     44 AGATTTCCCAAAAGCTGAACATGCTGAACGTCGGCGTAATCAAAGCGGAG     93
                     ||||.||.||.||..|.||||||||||||.|||||||.||.|||||.||.
BL03111___yfk     44 AGATCTCACAGAAATTAAACATGCTGAACATCGGCGTCATTAAAGCTGAA     93

BSNT_01318___     94 GATTTCAGTGATGAGAAGATTGAAGACCTCACGTACCTTCACAGCATGGT    143
                     ||.|||||..||||.|||.||||||||||....|||||.|||...|||||
BL03111___yfk     94 GACTTCAGCAATGAAAAGCTTGAAGACCTTGAATACCTGCACCAAATGGT    143

BSNT_01318___    144 GATGAAAAAAGAATCATTCAGCCCAAGTGAAATGCAGGCGATTGCTCAAG    193
                     |||||||||..||||.|||||.||.||.|||||||||||.||.||..|.|
BL03111___yfk    144 GATGAAAAAGAAATCTTTCAGTCCGAGCGAAATGCAGGCAATCGCAGAGG    193

BSNT_01318___    194 AATTAGCCTCGCTTCGTAAATAA    216
                     ||.|.|||.|.||.||.||||||
BL03111___yfk    194 AACTGGCCGCACTCCGAAAATAA    216


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