Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01593 and BL03168
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:03
# Commandline: needle
# -asequence dna-align/BSNT_01593___yhcX.1.5803.seq
# -bsequence dna-align/BL03168___yhcX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01593___yhcX-BL03168___yhcX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01593___yhcX-BL03168___yhcX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01593___yhcX
# 2: BL03168___yhcX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1547
# Identity: 1228/1547 (79.4%)
# Similarity: 1228/1547 (79.4%)
# Gaps: 13/1547 ( 0.8%)
# Score: 4833.5
#
#
#=======================================
BSNT_01593___ 1 TTGTCTGAGAAATTAGATTTGACCCGGTTTGAAAAGAAAATGGTTATCCG 50
.||||.||.|||.|.|||.|..||||.||||||||.||.||.||.|||||
BL03168___yhc 1 GTGTCCGAAAAACTGGATCTTTCCCGCTTTGAAAAAAAGATCGTCATCCG 50
BSNT_01593___ 51 CAATATCGAAGAGAAAGACATCGACAAGATTATCGATCTTCAAAAGGACT 100
||||||.|||||.|||||.|||||||..||.||||..||||||.||...|
BL03168___yhc 51 CAATATTGAAGAAAAAGATATCGACAGCATCATCGGGCTTCAAGAGCTTT 100
BSNT_01593___ 101 GCTTTCCGGGGATGGAACCTTGGAAGCGAGAGCATTT--AATCAGCCATT 148
|.||||||||.|||...||.|||||.||.||||||.| || |||||||
BL03168___yhc 101 GTTTTCCGGGAATGATCCCATGGAAACGGGAGCATCTGGAA--AGCCATT 148
BSNT_01593___ 149 TGGAGCATTTTCCAGACGGGCAGTTTTGTGCAGAATTCGAAGGTGAAATT 198
||||.||.||.||.||.||.||||||||.|||||..|.||.||.|||.|.
BL03168___yhc 149 TGGAACACTTCCCGGAAGGCCAGTTTTGCGCAGAGCTTGACGGAGAAGTG 198
BSNT_01593___ 199 ATCGGTTCGTGCTCAAGTCTCCTGATTAACTTTGATGAATATGATGACCG 248
||||||||.||.|||||.||..||||.|||||||||||||||||.|||.|
BL03168___yhc 199 ATCGGTTCCTGTTCAAGCCTGTTGATCAACTTTGATGAATATGACGACAG 248
BSNT_01593___ 249 CCATACGTGGCAGGACATTACAGATGACGGTTATATCACCAACCATAATC 298
.|||||.||||||||.||||||||.|||||.|||||.||.||.||.||||
BL03168___yhc 249 ACATACATGGCAGGATATTACAGACGACGGGTATATTACGAATCACAATC 298
BSNT_01593___ 299 CTGACGGCTTGAATATGTACGGAATTGAAGTCATGGTGCA-CCCGAAATA 347
|.||||||||.||.||||||||.||.||.||||||||.|| |||| ||||
BL03168___yhc 299 CCGACGGCTTAAACATGTACGGCATCGAGGTCATGGTTCATCCCG-AATA 347
BSNT_01593___ 348 CAGACGAATGAAGATCGGCCACCGTTTGTACGAGGCGAGAAAGGACTTAG 397
||||||.||||||||||||||||||.|.||.||.|||.||||.||..|.|
BL03168___yhc 348 CAGACGGATGAAGATCGGCCACCGTCTCTATGAAGCGCGAAAAGATCTGG 397
BSNT_01593___ 398 CCAGACGCTTAAACCTGAAAAGCATCATCATAGGCGGACGGATTCCAAAC 447
|.||.|||||.||..|.||.|||||.|||||.|||||..|.|||||.|||
BL03168___yhc 398 CAAGGCGCTTGAATTTAAAGAGCATTATCATCGGCGGCAGAATTCCGAAC 447
BSNT_01593___ 448 TATCACAAATATGCAGATGAAATGACAGCGAGAGAGTATGTTGAACAGGT 497
|||||.||.||.||....||.|||||..||||.||||||||.||||||||
BL03168___yhc 448 TATCATAAGTACGCTTCCGAGATGACGCCGAGGGAGTATGTCGAACAGGT 497
BSNT_01593___ 498 GACACGCCACCAAATATACGATCCGGTTCTTTCTTTTCAGCTGATGAACG 547
.|..|.||||||.|||||.||||||||.|||||.||.||||||.||||||
BL03168___yhc 498 CATCCACCACCAGATATATGATCCGGTCCTTTCGTTCCAGCTGCTGAACG 547
BSNT_01593___ 548 GCTTTACCCTTATGCGAATTAACCCGAATTATCTCCCAGATGATACAGCT 597
|.||.|||.|.|||||.||.||||||||.||||||||.|||||.|.|||.
BL03168___yhc 548 GATTCACCATGATGCGGATCAACCCGAACTATCTCCCGGATGACAGAGCA 597
BSNT_01593___ 598 TCGATCAAGTATGCGACGCTGATGGAATGGAATAATGTCGATTATCTAC- 646
||.|.|||.||||||||..|||||||.|||||||||||||| ||||
BL03168___yhc 598 TCAAGCAAATATGCGACATTGATGGAGTGGAATAATGTCGA----CTACT 643
BSNT_01593___ 647 CGCAGCAGACAAAACGCTATTATAAATCGGCGTTCCCTGTTAGAATTTGT 696
.||.||||||.||.||||||||.|||||.||.||.||.||.|||||.||.
BL03168___yhc 644 TGCCGCAGACGAAGCGCTATTACAAATCAGCTTTTCCGGTGAGAATATGC 693
BSNT_01593___ 697 GTGATCCAATACGAAATGAAGAAAATTTATTCCTTTGAGGAATTTGCGAA 746
|||||.|||||.|||||||||.|.||..|||||||.|||||.||.||.||
BL03168___yhc 694 GTGATTCAATATGAAATGAAGCAGATCCATTCCTTCGAGGAGTTCGCCAA 743
BSNT_01593___ 747 TCAAGTAGAATACTATGTCGATGTTGCTTCCGACGCAAGATCTGATTTTG 796
.|||||.||||||||||..|||||.|||||.||||||.||.|.|||||||
BL03168___yhc 744 CCAAGTCGAATACTATGCAGATGTGGCTTCAGACGCAGGAGCGGATTTTG 793
BSNT_01593___ 797 CGGTGTTCCCGGAAATTTTCACAACCCAGCTGATGTCTTTCCTTGAGGAA 846
|.||.|..||||||||.||.||.||.|||||||||||.||.||.||.||.
BL03168___yhc 794 CCGTCTATCCGGAAATCTTTACGACGCAGCTGATGTCGTTTCTGGAAGAG 843
BSNT_01593___ 847 CGGTCACCGAGCTTGGCGGTGCAGAGAATTACCGAGTATACAGAAGATTA 896
||.|||||||||.||||.||.|||.|.||||||||.|||||||||||.||
BL03168___yhc 844 CGCTCACCGAGCCTGGCCGTTCAGCGGATTACCGAATATACAGAAGACTA 893
BSNT_01593___ 897 CATCAGCCTGTTTACTGACTTGGCTGTGAAGTATAACGTCAACATTATCG 946
.|||||||||||.||.|||.|.||.||.||.||.||.|||||||||||||
BL03168___yhc 894 TATCAGCCTGTTCACAGACCTTGCCGTTAAATACAATGTCAACATTATCG 943
BSNT_01593___ 947 GCGGATCTCATTTCGTCGAAGAGGAAGGCAAGATCTATAATATCGCTTAC 996
||||.||.||.|||||.|||||.|||||.||||||||.||||||||||||
BL03168___yhc 944 GCGGTTCCCACTTCGTTGAAGAAGAAGGAAAGATCTACAATATCGCTTAC 993
BSNT_01593___ 997 CTGTTCAGACGGGACGGAACAATCGAAAAGCAATACAAACTCCATATTAC 1046
.||||||||.||||||||||.||||||||||||||.||.|||||||||||
BL03168___yhc 994 TTGTTCAGAAGGGACGGAACCATCGAAAAGCAATATAAGCTCCATATTAC 1043
BSNT_01593___ 1047 GCCGAATGAACGCAAATGGTGGGGGATCAGCGCAGGAGACCAAGTTCGCG 1096
.|||||||||||.|||||||||||.||||||...||.|||.||||.||||
BL03168___yhc 1044 CCCGAATGAACGAAAATGGTGGGGCATCAGCAGGGGGGACGAAGTGCGCG 1093
BSNT_01593___ 1097 TGTTTGATACGGACTGCGGGAAAATCGCGATCCAGATCTGTTATGACATT 1146
|.|||||.||.||||||||.||||||||||||||||||||.||||||||.
BL03168___yhc 1094 TCTTTGACACAGACTGCGGCAAAATCGCGATCCAGATCTGCTATGACATC 1143
BSNT_01593___ 1147 GAATTTCCTGAGCTTGCCCGGATTGCGGCTGATAAAGGAGCCAAAATCAT 1196
||.|||||.|||||.|.|.|.||.||..|.||.|||||.|||||.||.||
BL03168___yhc 1144 GAGTTTCCGGAGCTAGGCAGAATCGCAACCGAAAAAGGGGCCAAGATTAT 1193
BSNT_01593___ 1197 CTTTACGCCATTTTGTACAGAAGACCGTCAAGGCTATCTGCGTGTCAGAT 1246
.|||||.||.||.||.||.||||||||.|||||||||.||||.|||||.|
BL03168___yhc 1194 TTTTACCCCTTTCTGCACGGAAGACCGCCAAGGCTATTTGCGAGTCAGGT 1243
BSNT_01593___ 1247 ACTGTTCGCAGGCTAGAGCGGTTGAAAATCAAATTTATACGGTTATCTCT 1296
||||..|.||.||.||||||||||||||.||..|.||.||||||||.||.
BL03168___yhc 1244 ACTGCGCTCAAGCAAGAGCGGTTGAAAACCAGGTGTACACGGTTATTTCC 1293
BSNT_01593___ 1297 GGAACGGTCGGAAACCTTCCGCAAACGGAAAACATGGATATCCAATACGC 1346
|||||||||||.||.||.||||||||.|||||.||||||||.||||||||
BL03168___yhc 1294 GGAACGGTCGGCAATCTGCCGCAAACCGAAAATATGGATATTCAATACGC 1343
BSNT_01593___ 1347 CCAGTCAGGCATCTTTGCCCCGTCTGATTTTGAATTCGCCCGAGACGGCA 1396
.||.||.|..||.||.||.||.||.|||||||||||.||..|.||.||.|
BL03168___yhc 1344 GCAATCCGCGATTTTCGCTCCTTCAGATTTTGAATTTGCAAGGGATGGAA 1393
BSNT_01593___ 1397 TTGTCGGCGAAACAAACCCGAATATTGAAATGGTTGTCATCGGCGATGTT 1446
|.|||||||||...||.|||||.|||||.|||||.||||||||||||||.
BL03168___yhc 1394 TCGTCGGCGAATGCAATCCGAACATTGAGATGGTGGTCATCGGCGATGTC 1443
BSNT_01593___ 1447 GACCTGGAAATTCTCAGAAGACAGCGCCAAAACGGTACAGTGCGCCAGCT 1496
||||||||||||||||||||||||||.||..||||.||.||.||.|||||
BL03168___yhc 1444 GACCTGGAAATTCTCAGAAGACAGCGGCAGGACGGAACGGTCCGGCAGCT 1493
BSNT_01593___ 1497 AAAAGACAGACGGCGTGATATTTATCA-TATTCAATATAAAAAATAA 1542
.||.||||||||.|.|||.||.|| || .|||||.|||||||||||.
BL03168___yhc 1494 CAAGGACAGACGCCATGACATCTA-CAGGATTCATTATAAAAAATAG 1539
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