Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01531 and BL03186

See Amino acid alignment / Visit BSNT_01531 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence dna-align/BSNT_01531___yhcB.1.5803.seq
#    -bsequence dna-align/BL03186___yhcB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01531___yhcB-BL03186___yhcB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01531___yhcB-BL03186___yhcB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01531___yhcB
# 2: BL03186___yhcB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 539
# Identity:     418/539 (77.6%)
# Similarity:   418/539 (77.6%)
# Gaps:          16/539 ( 3.0%)
# Score: 1567.0
# 
#
#=======================================

BSNT_01531___      1 ATGAAAATTTATGTAGTGTATGATAGTGAAGGCGAACATACTAAAGTGCT     50
                     ||||||||||||||.||.||.||.|||||||||||.|||||.|||..|||
BL03186___yhc      1 ATGAAAATTTATGTTGTTTACGACAGTGAAGGCGAGCATACGAAAAAGCT     50

BSNT_01531___     51 TGCAGAAGCGATTGCTGAAGGCGCGAGAGAAAACGGCGCGGCTGAAGTGT    100
                     .||.|||||.|||||.|||||||||.|.|||.|.|..||.||.||.|||.
BL03186___yhc     51 GGCTGAAGCCATTGCAGAAGGCGCGGGGGAACATGATGCTGCAGACGTGC    100

BSNT_01531___    101 TCATCGACCATGT-AGATCAGGCTGATATCCGCAAGCTTAAAGATATGGA    149
                     ..|||||.||||| || .|||||.|||||..|.|||||..||||.|||||
BL03186___yhc    101 GGATCGATCATGTCAG-CCAGGCGGATATTAGAAAGCTCGAAGAAATGGA    149

BSNT_01531___    150 TGCGATTATTTGGGGATGCCCAGGGCATTTCGGAACAATCAGCTCCGGTC    199
                     .||.||.||.|||||||||||.||.||||||||.||||||||||||||..
BL03186___yhc    150 CGCTATCATCTGGGGATGCCCGGGCCATTTCGGTACAATCAGCTCCGGAT    199

BSNT_01531___    200 TTAAAACTTGGATCGACAGACTTGGCTACTTGTGGGCTGAAGGCGAGCTG    249
                     |.|||||||||||||||||.||.||||||.|.|||||.|||||..|||||
BL03186___yhc    200 TAAAAACTTGGATCGACAGGCTGGGCTACCTTTGGGCGGAAGGAAAGCTG    249

BSNT_01531___    250 ATCAACAAAGTCGGTGCTGTCTTCTGCACAACGGCAACAACACACGGCGG    299
                     |||||.||..||||.||.|||||||||||||||||.||.||.||||||||
BL03186___yhc    250 ATCAATAAGATCGGCGCAGTCTTCTGCACAACGGCGACGACCCACGGCGG    299

BSNT_01531___    300 -CTTGGAAATGACAATGCACAATTTAATCACGCCGATGTTCCACCAAGGC    348
                      ||| ||...||||||||.|||.|||||.||.||||||.|.||.||||||
BL03186___yhc    300 TCTT-GAGGCGACAATGCTCAACTTAATAACACCGATGCTTCATCAAGGC    348

BSNT_01531___    349 ATGATTGTTGTCGGACTGCCTGGGAACGTGCCTGAAAACGCACTTTAT--    396
                     |||||.||.|||||..|||||||.||.||.||||||||.|  ||||||  
BL03186___yhc    349 ATGATGGTCGTCGGCTTGCCTGGAAATGTACCTGAAAATG--CTTTATAC    396

BSNT_01531___    397 GGCTCTTATTACGGAGCAGGTGTCACTTGTCCGGTAGACAGTGATGAGTT    446
                     ||.|||||||||||.|||||..||||.|||||.||.||||||||.||.||
BL03186___yhc    397 GGGTCTTATTACGGTGCAGGCATCACGTGTCCTGTCGACAGTGACGAATT    446

BSNT_01531___    447 AAT-GTCTGAGGAAGGTATTCAGCTTGGACGCGCGTTGGGAAGACGTGTC    495
                     .|| |.| ||||||||..|..||||.||.||.||.||.||.|||||.|||
BL03186___yhc    447 GATCGGC-GAGGAAGGCCTGGAGCTGGGCCGGGCTTTAGGCAGACGCGTC    495

BSNT_01531___    496 AGCCAAGTCACAGGAAACC---TAACAGCAGGACAGTAA    531
                     ..|||.||..|||   |||   |.|||||||||||||.|
BL03186___yhc    496 GCCCAGGTGGCAG---ACCGCTTTACAGCAGGACAGTGA    531


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