Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01528 and BL03188
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence dna-align/BSNT_01528___yhbJ.1.5803.seq
# -bsequence dna-align/BL03188___yhbJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01528___yhbJ-BL03188___yhbJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01528___yhbJ-BL03188___yhbJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01528___yhbJ
# 2: BL03188___yhbJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 689
# Identity: 479/689 (69.5%)
# Similarity: 479/689 (69.5%)
# Gaps: 79/689 (11.5%)
# Score: 1762.5
#
#
#=======================================
BSNT_01528___ 1 ATGATAGAGGATGAAACGAAAGGAGAAAACAAAATGAACAGAGGACGTTT 50
||||.||.|||||||||
BL03188___yhb 1 ---------------------------------ATGAGCAAAGGACGTTT 17
BSNT_01528___ 51 AATTCTGACCAACATTATCGGTTTGATTGTTGTTCTTGCAATTATAGCTG 100
||||..|||.|||||||||||..|.||..|.||.|||||.||..||||.|
BL03188___yhb 18 AATTGCGACGAACATTATCGGACTCATCATCGTGCTTGCCATCTTAGCAG 67
BSNT_01528___ 101 GAGGTGCTTACTACTATTATCAAAGCACAAACTACGTAAAAACAGATGAA 150
|||||||.||.|.|||||||.|.||||..|.|||.||.|||||.||||||
BL03188___yhb 68 GAGGTGCGTATTTCTATTATGACAGCATCAGCTATGTGAAAACCGATGAA 117
BSNT_01528___ 151 GCAAAAGTAGCGGGCGATATGGCTGCTATTACTGCTCCAGCAGCAGGTAA 200
||..|.||.||.|||||.|||||.|.||||||.||.||.|||.||||.||
BL03188___yhb 118 GCGCACGTGGCAGGCGAGATGGCCGATATTACGGCGCCTGCATCAGGGAA 167
BSNT_01528___ 201 AGTATCTGACTGGGATCTGGATGAAGGAAAAACAGT----------GAAA 240
..|..|.||.||||||.||.|.||||||..||.||| ||||
BL03188___yhb 168 GCTCGCAGATTGGGATTTGAAAGAAGGATCAAAAGTTTCGAAGGACGAAA 217
BSNT_01528___ 241 AAAGGCGACACAGTTGCAAAAATCAAAGGCGAACAAACTGTTGACGTAAA 290
|| ||| ||.|||||||||||.||||||||.||||||||.||
BL03188___yhb 218 AA-------ACA---GCGAAAATCAAAGGGGAACAAACGGTTGACGTGAA 257
BSNT_01528___ 291 ATCCATTATGGATGGAACAATTGTGAAAAACGAAGTGAAAAACGGACAAA 340
.||.||.|||||.|||||.|||||.||||||||||.|||..|.||.||.|
BL03188___yhb 258 GTCGATCATGGACGGAACGATTGTCAAAAACGAAGCGAAGGAAGGCCAGA 307
BSNT_01528___ 341 CCGTACAAGCTGGTACAACAATTGCACAAACGATTGACATGGACAACCTA 390
.|||||||||.|||..|||..||||..||||.||.||||||||..|.||.
BL03188___yhb 308 TCGTACAAGCCGGTCAAACGCTTGCGAAAACAATCGACATGGATCATCTG 357
BSNT_01528___ 391 TACATCACAGCAAATATTAAAGAAA-----CAGATATTGCGGATATTGAA 435
|||||.||.||.||.|||.|||||| |.||.| ||.||.|||
BL03188___yhb 358 TACATTACTGCTAACATTGAAGAAAACGACCTGAAA-----GACATCGAA 402
BSNT_01528___ 436 GTAGG----AAATAGTGTAGACGTTGTAGTTGACGGAGACCCTGATACAA 481
..||| ||| ||.||..|.||.||||||||.||..|.|..||.|
BL03188___yhb 403 AAAGGGGACAAA----GTCGATATCGTCGTTGACGGTGATTCAGGCACTA 448
BSNT_01528___ 482 CATTTGACGGTACTGTGGAAGAAATTGGCTATGCGACTAACTCAACTTTT 531
|||||||.||.|.|||.||||||||.|||||||||||.||||||||.|||
BL03188___yhb 449 CATTTGAAGGGAATGTCGAAGAAATCGGCTATGCGACAAACTCAACATTT 498
BSNT_01528___ 532 GATATGCTTCCTTCTACA----AATTCAAGCGGAAACTACACAAAAGTAA 577
||..|||||.|| || ||||||||||||||||||||.|||||||
BL03188___yhb 499 GACTTGCTTTCT----CAAAGCAATTCAAGCGGAAACTACACGAAAGTAA 544
BSNT_01528___ 578 CACAAAAAATTCCTGTGAAAATTTCAATCAAAAACCCATCTGATAAGGTG 627
|.||.|||.|.||||||||||||||||||||||||||.|||||.||.|||
BL03188___yhb 545 CGCAGAAAGTACCTGTGAAAATTTCAATCAAAAACCCGTCTGACAAAGTG 594
BSNT_01528___ 628 CTTCCTGGAATGAATGCATCTGTTAAAATTTCTGAGTAA 666
||.||.||||||||.|||||.||.||||||||..|.|||
BL03188___yhb 595 CTGCCGGGAATGAACGCATCCGTGAAAATTTCAAAATAA 633
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