Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01526 and BL03189
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence dna-align/BSNT_01526___yhbH.1.5803.seq
# -bsequence dna-align/BL03189___yhbH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01526___yhbH-BL03189___yhbH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01526___yhbH-BL03189___yhbH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01526___yhbH
# 2: BL03189___yhbH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1184
# Identity: 934/1184 (78.9%)
# Similarity: 934/1184 (78.9%)
# Gaps: 22/1184 ( 1.9%)
# Score: 3661.5
#
#
#=======================================
BSNT_01526___ 1 ATGTCCCAAAATGACAGCGGCCATTTTTTGATTTCTGAGGAAAACTGGTC 50
||||||||.||.||||..|||||||||.|.||||||.|||||.|||||||
BL03189___yhb 1 ATGTCCCATAAAGACAATGGCCATTTTATTATTTCTCAGGAAGACTGGTC 50
BSNT_01526___ 51 CCTCCATCGCAAAGGCTTCGATGACCAGCAGCGCCACCAGAAAAAAGTGC 100
||||||.||.|||||.|..||||||||.|||||.|||||||||||.||||
BL03189___yhb 51 CCTCCACCGAAAAGGGTATGATGACCAACAGCGTCACCAGAAAAAGGTGC 100
BSNT_01526___ 101 AGGAAGCGATCAAAAACAATCTTCCGGACCTCGTAACTGAGGAAAGCATT 150
||||.|||||||||||||||||.||.|||||..|.||.||.||||||||.
BL03189___yhb 101 AGGACGCGATCAAAAACAATCTGCCTGACCTGATTACAGAAGAAAGCATC 150
BSNT_01526___ 151 ATTATGTCTAATGGAAAAGATGTAGTGAAGATCCCAATCCGTTCACTTGA 200
||||||||.||.||.||||||.|.||.||.||.||.||.||.||..|.||
BL03189___yhb 151 ATTATGTCCAACGGCAAAGATATTGTCAAAATTCCGATTCGCTCGTTGGA 200
BSNT_01526___ 201 TGAGTATAAAATCCGTTATAACTATGATAAAAATAAACATGTAGGGCAAG 250
|||||||||||||||.|||||||||||||||||||||||||..||.||.|
BL03189___yhb 201 TGAGTATAAAATCCGCTATAACTATGATAAAAATAAACATGCCGGCCAGG 250
BSNT_01526___ 251 GAGACGGCGAGAGCCAGGTTGGAGATGTTGTGGCCCGGGATGGATCAGAC 300
||||||||||.|||||.||.||||||.|.||.||..||||.||.||.|
BL03189___yhb 251 GAGACGGCGACAGCCAAGTAGGAGATATCGTCGCAAGGGACGGCTCTG-- 298
BSNT_01526___ 301 AAAAAACAAGGGC-CTGGAAAAGGGCAGGGTGCCGGTGATCAGGCAGGCG 349
|.||...|||| |.||.|||||.|||||.||.||.||||||||.||.|
BL03189___yhb 299 --ATAAGCGGGGCGCCGGCAAAGGCCAGGGAGCGGGCGATCAGGCCGGTG 346
BSNT_01526___ 350 AGGATTATTATGAAGCGGAAGTTTCATTAATGGATTTAGAAGAAGCGCTT 399
|.|||||||||||||||||||||||.|||||.|||||.|||||.|||||.
BL03189___yhb 347 AAGATTATTATGAAGCGGAAGTTTCGTTAATCGATTTGGAAGAGGCGCTC 396
BSNT_01526___ 400 TTTAAAGAATTAGAGCTTCCGAATCTCCAACAAAAAGAGCGGGACAATAT 449
||.|..|||.|.|||||.||||||.|..||||.||||||||.||..||||
BL03189___yhb 397 TTCAGCGAAATGGAGCTGCCGAATTTAGAACAGAAAGAGCGCGATGATAT 446
BSNT_01526___ 450 CATTCATACAGATATCGAGTTTAATGATATCCGTAAAACAGGGTTAACCG 499
|.||.....||||||.||.||.||.||||||||.|||||.||.||.||.|
BL03189___yhb 447 CGTTGTCGAAGATATTGAATTCAACGATATCCGCAAAACGGGTTTGACGG 496
BSNT_01526___ 500 GTAATATTGATAAGAAAAGAACGATGATGTCA--GCCTTTAAACGAAACG 547
|.||.||.|||||||||||||||||| .||| ||.|||||.|||||||
BL03189___yhb 497 GCAACATCGATAAGAAAAGAACGATG--CTCAGCGCATTTAAGCGAAACG 544
BSNT_01526___ 548 CAATGTCAGGAAAACCGTCGTTCTACCCAATTTATCCGGAGGACCTGAAA 597
|||||.|.||||||||||||||.||.||.||.|||||.||.|||.|.|||
BL03189___yhb 545 CAATGACTGGAAAACCGTCGTTTTATCCGATCTATCCCGAAGACTTAAAA 594
BSNT_01526___ 598 TATAAGACGTGGAATGACATC-ACAAAGCCCGAATCAAAAGCCGTCGTTT 646
|.|||.|||||||||||| || ..||||||.||||||||||||||.||..
BL03189___yhb 595 TTTAAAACGTGGAATGAC-TCTGTAAAGCCTGAATCAAAAGCCGTTGTGC 643
BSNT_01526___ 647 TAGCCATGATGGATACAAGCGGCAGTATGGGGGTTTGGGAAAAATACATG 696
|.||||||||||||||.|||||....|||||.||||||||||||||.|||
BL03189___yhb 644 TCGCCATGATGGATACGAGCGGATCGATGGGCGTTTGGGAAAAATATATG 693
BSNT_01526___ 697 GCCAGAAGCTTCTTTTTCTGGATGACCCGTTTTTTGCGGACAAAATACGA 746
||..||||.||.||.||.||||||||.||||||||.||||||||.||.||
BL03189___yhb 694 GCGCGAAGTTTTTTCTTTTGGATGACACGTTTTTTACGGACAAAGTATGA 743
BSNT_01526___ 747 GACTGTGGAAATTGAATTTATTGCCCATCATACAGAAGCAAGAGTGGTCT 796
.||.||.||.||.||.|||||.||||||||||||||.||.|.||||||.|
BL03189___yhb 744 AACGGTCGATATCGAGTTTATCGCCCATCATACAGAGGCCAAAGTGGTAT 793
BSNT_01526___ 797 CGGAGGAGGATTTTTTCTC-AAAGGGAGAAAGCGGCGGAACCATTTGTTC 845
|.||.||.|||||.||.|| |||||| ||||||||.|||||.||||||||
BL03189___yhb 794 CAGAAGAAGATTTCTTTTCGAAAGGG-GAAAGCGGGGGAACAATTTGTTC 842
BSNT_01526___ 846 TTCCGTATATCGGAAGTCGCTTGAGCTTATTGATGAAAAGTACAATCCCG 895
.||.|||||.||.||.||.||.|||||.||.||.||.||.|||.||||..
BL03189___yhb 843 ATCTGTATACCGCAAATCCCTCGAGCTGATCGAAGACAAATACCATCCGA 892
BSNT_01526___ 896 CCCGCTATAACATTTATCCGTTTCATTTTTCTGACGGTGACAACCTGACA 945
|.|||||||||||||||||||||||||||||.|||||.||.||.||||||
BL03189___yhb 893 CACGCTATAACATTTATCCGTTTCATTTTTCGGACGGCGATAATCTGACA 942
BSNT_01526___ 946 TCTGATAACGCGCGCTGTGTGAAGCTGGTCAATGATATTATGAAGAAGGC 995
||.||.||||||||.||.||.|||||.|||...||.||||||.||||.||
BL03189___yhb 943 TCCGACAACGCGCGGTGCGTCAAGCTTGTCGGAGAGATTATGGAGAAAGC 992
BSNT_01526___ 996 CAATCTATTCTGTTACGGCGAGGTCAATCAGTACAACAGGCATTCAACGT 1045
.|||.||||.||.||||||||.|||||.|||||||||||.||||||||.|
BL03189___yhb 993 GAATATATTTTGCTACGGCGAAGTCAACCAGTACAACAGACATTCAACTT 1042
BSNT_01526___ 1046 TAATGTCTGCATATAAAAATGTAAAAGATGAGAAATTTAAGTACTATATT 1095
|||||||.||.||.||||||.|.|||.||||.|||||.|||||.|||.|.
BL03189___yhb 1043 TAATGTCAGCCTACAAAAATATTAAAAATGAAAAATTCAAGTATTATGTG 1092
BSNT_01526___ 1096 TTAAAACAGAAATCTGATGTTTTTCAGGCTCTAAAGAACTTTTTCAGAAA 1145
.|.|||||||||.|.|||||||||||||||||.||||.|||.||||..||
BL03189___yhb 1093 CTGAAACAGAAAGCCGATGTTTTTCAGGCTCTGAAGAGCTTCTTCAACAA 1142
BSNT_01526___ 1146 TGAAGAGTCTGGTGTAAGCCATCAATTTTCGTAA 1179
|||||| |.|.||.||||.|.|.|.|
BL03189___yhb 1143 TGAAGA---------ACGGCACCAATATACATGA 1167
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