Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01517 and BL03193
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence dna-align/BSNT_01517.1.5803.seq
# -bsequence dna-align/BL03193___yhbD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01517-BL03193___yhbD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01517-BL03193___yhbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01517
# 2: BL03193___yhbD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 692
# Identity: 425/692 (61.4%)
# Similarity: 425/692 (61.4%)
# Gaps: 127/692 (18.4%)
# Score: 1255.5
#
#
#=======================================
BSNT_01517 1 ATGG---AAGAACAATTAATCTCTAAAAAAGAATTACTTGAAAGAACATC 47
|||| |.||..|.|||||.||.||||||||..|.||.||....||.||
BL03193___yhb 1 ATGGTTCAGGATGATTTAATTTCAAAAAAAGAGCTGCTGGATTTGACTTC 50
BSNT_01517 48 GATTTCATACGGTCAGCTGTATCGATGGAAGCGGAAAAACTTAATACCTG 97
|||.||.|||||.|||||.|||.|||||||.||||||||.||||||||||
BL03193___yhb 51 GATCTCGTACGGACAGCTCTATAGATGGAAACGGAAAAATTTAATACCTG 100
BSNT_01517 98 AGGAATGGTTTATTCGTAAATCCACATTTACAGGGCAAGAGACGTTTTTT 147
|.||.||||||||.||.||.||.||.||.||.||.|||||.|||||||||
BL03193___yhb 101 AAGAGTGGTTTATCCGGAAGTCTACGTTCACCGGACAAGAAACGTTTTTT 150
BSNT_01517 148 CCGAGAGAGGAGATTTTAAAACGTATATCAATGATTCAAAAGATGAAAGA 197
|||||.||.||.|||||||||.|.||...||..|||||||..||||||||
BL03193___yhb 151 CCGAGGGAAGACATTTTAAAAAGAATTGAAACCATTCAAAGCATGAAAGA 200
BSNT_01517 198 AAA--TTTGTCTTTGGATGAAATGAGGGAAATGCTGTCGCCGAAAATGAA 245
||| |||..||| |||||.|||..|||||||.|.|||||..|..|||.
BL03193___yhb 201 AAACCTTTCCCTT--GATGAGATGGCGGAAATGTTTTCGCCCGATTTGAC 248
BSNT_01517 246 GGATGTCAGCATGA-CCGCTGATGAATTGCTTCATAAAGGTTTGGTTTCA 294
.||..|.|.|..|| |||| |..||..||||..|.|||||..|.||||||
BL03193___yhb 249 CGAACTAAACGCGAGCCGC-GGGGAGCTGCTAAAAAAAGGCATCGTTTCA 297
BSNT_01517 295 -AGGCCTGCTCTTGAAGCCTATTCAGAAGA------CGGAGGAAGTCCGG 337
|.|| |.||.|| ||.|.||..||||| |||| ||...||
BL03193___yhb 298 GAAGC--GGTCATG--GCGTTTTTTGAAGAATGCACCGGA--AAACGCG- 340
BSNT_01517 338 TTTTTTCATCCA-GCGATTTG---------CTTTC-GCTATATGTGCTTG 376
.||||||| ...||||| |||.| ||| ||||||||.|
BL03193___yhb 341 ----ATCATCCATTTAATTTGACAGAAGCACTTGCGGCT-TATGTGCTGG 385
BSNT_01517 377 AGGGACTGCTGCAGTCTGGAAATGTCAGCCTTGCAGAAGCAAAAATG--G 424
|.||..||||.||.||.||..|..|||||||.|..||||..|||||| |
BL03193___yhb 386 AAGGCTTGCTTCAATCCGGCGACATCAGCCTGGATGAAGGGAAAATGGTG 435
BSNT_01517 425 CTGCAGAGGTATTAAAGAAGCATGATAATGAA-GAGATTGAAAAACAGAC 473
||| ||.|| |||.||...||| |||...|||||..||
BL03193___yhb 436 CTG--GATGT----------CATCATGTCGAACGAGGCGGAAAACAAG-- 471
BSNT_01517 474 GGA--GCTGATTGTGCTCCGCAAGCTCGGTGTCACAACTTGTTTTATAGC 521
||| ||||.||||||||||.||||||||.||..||||.|||.|.||
BL03193___yhb 472 GGAAGGCTGCTTGTGCTCCGGAAGCTCGGCGTTGCAACATGTCTGAT--- 518
BSNT_01517 522 GGCTGCGGCGGACAGCATTTTGTTTGAATCATCCGTAAAGGTTGTGGAAC 571
|||.|.||.|||||||.||||.|| |||||..||..|
BL03193___yhb 519 ---TGCCGAGGGCAGCATTGTGTTGGA---------AAAGGGAGTCAA-- 554
BSNT_01517 572 GGGTAGATTTATTAAAAGCT----TCA-----------------GAGGAA 600
||||| ..||| ||| ||.|||
BL03193___yhb 555 -GGTAG---------CCGCTGACATCAATCTGGCGGCGAGCAGTGAAGAA 594
BSNT_01517 601 TTAAAAACAACATTTATGCAGGAGGGCCATCAATGGATGTAG 642
||.|||||||.|||.|||.|.
BL03193___yhb 595 TTGAAAACAAAATTCATGTAA--------------------- 615
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