Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01514 and BL03196
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence dna-align/BSNT_01514.1.5803.seq
# -bsequence dna-align/BL03196___yhbA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01514-BL03196___yhbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01514-BL03196___yhbA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01514
# 2: BL03196___yhbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1194
# Identity: 858/1194 (71.9%)
# Similarity: 858/1194 (71.9%)
# Gaps: 78/1194 ( 6.5%)
# Score: 3012.5
#
#
#=======================================
BSNT_01514 1 ATGAACGTTTATCAGCTCAAAGAAGAATTAATTGAATACGCGAAAAGC-- 48
|||.|.||..|..|.||.|||.|.||..|.||.||||.||| |.|||
BL03196___yhb 1 ATGGATGTGAAAAAACTGAAACAGGATGTCATCGAATTCGC--ACAGCAA 48
BSNT_01514 49 ATTGGCGTGGACAAGAT-TGGTTTTACGACC---GCTGATACTTTTGACA 94
||.|||.|.||.||.|| .|||| || || ||.|||||.|||||.|
BL03196___yhb 49 ATCGGCATTGATAAAATCCGGTT---CG-CCAGTGCAGATACATTTGAAA 94
BSNT_01514 95 GTTTAAAAGACCGTTTGATTCTTCAAGAA----TCACTCGGCTATCTCTC 140
..||||||||.||.|||||| .|||| .|.||.||||||...||
BL03196___yhb 95 CATTAAAAGAACGATTGATT----GAGAACCGGGCCCTTGGCTATGAATC 140
BSNT_01514 141 CGGCTTTGAAGAGCCGGATATCGAAAAAAGGGTGACGCCGAAGCTTCTTT 190
.|||||||||||.||.|||.|.||||||.||..||..|||.|.||.||||
BL03196___yhb 141 AGGCTTTGAAGAACCCGATCTTGAAAAACGGACGAACCCGGATCTGCTTT 190
BSNT_01514 191 TGCCGAAAGCGAAATCAATAGTGGCAATTGCTCTCGCATATCCTTCCAGA 240
|||||||.|||||.||.||..|.||.||.||.||.|||||.||.||.|.|
BL03196___yhb 191 TGCCGAAGGCGAAGTCGATTATCGCCATCGCCCTTGCATACCCCTCAAAA 240
BSNT_01514 241 ATGAAGGATGCGCCGAGAAGCACGAGAACTGAGCGCAGGGGCATTTTTTG 290
|||||.||.|||||||||||||.||.|...||.||.||||||||.|||||
BL03196___yhb 241 ATGAAAGACGCGCCGAGAAGCAAGAAAGGCGAACGAAGGGGCATCTTTTG 290
BSNT_01514 291 CAGAGCCTCCTGGGGAAAAGACTATCATGATGTGCTGAGGGAAAAGCTTG 340
||||||.|||||||||||.||.||||||.||||.|||.|.||||||||||
BL03196___yhb 291 CAGAGCTTCCTGGGGAAAGGATTATCATCATGTCCTGCGCGAAAAGCTTG 340
BSNT_01514 341 ATCTGCTGGAGGATTTTCTAAAA----AGC-AAGCATGAGGATATCAGAA 385
|||.|||.||.||.|||.|.||| ||| |||| |||.||||||
BL03196___yhb 341 ATCAGCTTGAAGAATTTTTGAAAGCACAGCGAAGC-----GATGTCAGAA 385
BSNT_01514 386 CGAAGTCAATGGTTGATACAGGTGAATTGTCTGATCGCGCCGTTGCGGAA 435
|||||||.|||||.||.||.|||||..|.||.||..|.||.||.||.||.
BL03196___yhb 386 CGAAGTCGATGGTGGACACCGGTGAGCTTTCAGACAGAGCTGTCGCAGAG 435
BSNT_01514 436 CGTGCCGGAATTGGATTCAGTGCGAAA-AACTGTATGATCACAACACCCG 484
|||||.||.||.||.|..||.| |||| |||||.|||||||..||.||.|
BL03196___yhb 436 CGTGCGGGCATCGGCTGGAGCG-GAAAGAACTGCATGATCATTACGCCTG 484
BSNT_01514 485 AGTATGGCTCTTATGTGTATTTGGCGGAAATGATCACAAATATCCCTTTT 534
|.|..||.|||||.||.||.||||||||||||||.||.|||||.||.|||
BL03196___yhb 485 AATTCGGATCTTACGTTTACTTGGCGGAAATGATTACGAATATTCCCTTT 534
BSNT_01514 535 GAGCCTGATGTGCCGATTGAAGATATGTGCGGGTCCTGCACGAAATGCTT 584
||||||||||.|..|||.|||||....|||||.||.||||..||.|||.|
BL03196___yhb 535 GAGCCTGATGAGAGGATCGAAGACCAATGCGGCTCATGCAACAAGTGCAT 584
BSNT_01514 585 GGACGCCTGTCCGACGGGAGCACTGGTTAATCCCGGGCAGCTTAATGCGC 634
.||.||.||.|||||.||.||.||.||.||.||.||||||||.||..|.|
BL03196___yhb 585 CGAGGCATGCCCGACCGGCGCGCTCGTCAAGCCTGGGCAGCTCAACTCCC 634
BSNT_01514 635 AGCGCTGCATCTCTTTTCTGACCCAGACAAAAGGATTTTTACCTGATGAA 684
|||||||||||.||||||.|||.||||||||.||.|||.|.|||||.||.
BL03196___yhb 635 AGCGCTGCATCGCTTTTCAGACGCAGACAAAGGGTTTTCTGCCTGACGAG 684
BSNT_01514 685 TTCCGGACAAAAATCGGAAACCGCCTGTACGGGTGCGATACGTGCCAAAC 734
|||||.||.||||||||||||.|..|.|||||.||.|||||||||||.|.
BL03196___yhb 685 TTCCGTACGAAAATCGGAAACAGGATCTACGGCTGTGATACGTGCCAGAT 734
BSNT_01514 735 GGTATGCCCTCTCAATAAAGGGAAGGATTTTCATCTTCATCCGGAAATGG 784
|||||||||....|||||||||...|||||||||||.|||||.|||||||
BL03196___yhb 735 GGTATGCCCGAAAAATAAAGGGGTCGATTTTCATCTGCATCCTGAAATGG 784
BSNT_01514 785 AGCCTGATCCTGAGATTGCCAAACCGTTATTGAAGCCGCTTTTGACCATC 834
||||.||.||||||||||||||.|||.|.||.|||||||||.||||.||.
BL03196___yhb 785 AGCCGGACCCTGAGATTGCCAAGCCGCTTTTAAAGCCGCTTCTGACGATG 834
BSNT_01514 835 AGCAATCGGGAATTTAAGGAGAAATTCGGGCATGTCTCAGGTTCTTGGCG 884
...|||||.|||||.||.||.||.|||||.||.||..|.||.||.|||.|
BL03196___yhb 835 TCGAATCGCGAATTCAAAGAAAAGTTCGGCCACGTGGCCGGCTCATGGAG 884
BSNT_01514 885 CGGAAAAAAACCGATTCAGCGAAACGCCATTCTCGCGCTTGCGCATTTTA 934
.||.|||||.|||||||||.||||.||.|||.||||.|||||.|||||||
BL03196___yhb 885 AGGCAAAAAGCCGATTCAGAGAAATGCGATTATCGCACTTGCCCATTTTA 934
BSNT_01514 935 AGGATGCTTCCGCACTGCCTGAATTGACGGAACTGATGCACAAGGATCCG 984
|.||..|...|||.||.||||||.|||..||.|||||||||||.||||||
BL03196___yhb 935 AAGAAACGGACGCTCTCCCTGAACTGATTGAGCTGATGCACAAAGATCCG 984
BSNT_01514 985 CGTCCTGTCATCAGGGGGACAGCCGCATGGGCAATCGGAAAAATCGGAGA 1034
||.||.|||||||||||.||.|||||||||||..|||||||.|||||
BL03196___yhb 985 CGGCCGGTCATCAGGGGAACCGCCGCATGGGCTGTCGGAAAGATCGG--- 1031
BSNT_01514 1035 CCCCGCATACGCGGAAGAGCT---TGAA------AAAGCGCTGGAAAAAG 1075
||.| |||||.|.|.| |||| ...|||||.|...|.|
BL03196___yhb 1032 ---CGGA---GCGGATGTGATGAGTGAATTGGAGCGCGCGCTCGCGCACG 1075
BSNT_01514 1076 AGAAGGATGAAGAGGC-AAAGCTGGAAATTGAAAAAGGAATTGATTTGCT 1124
||.||||||||||.|| |||||| ||||||.|||||||.||.|...||.|
BL03196___yhb 1076 AGCAGGATGAAGACGCAAAAGCT-GAAATTCAAAAAGGCATCGGCCTGTT 1124
BSNT_01514 1125 AAAAGCTTCAGGCATGACTAAACGAG-GC------TTGTCCTGA 1161
||||| ||||||| || |||.
BL03196___yhb 1125 AAAAG--------------AAACGAGTGCGACTAATTGA----- 1149
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