Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02801 and BL03234
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:34
# Commandline: needle
# -asequence dna-align/BSNT_02801___glnR.1.5803.seq
# -bsequence dna-align/BL03234___glnR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02801___glnR-BL03234___glnR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02801___glnR-BL03234___glnR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02801___glnR
# 2: BL03234___glnR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 414
# Identity: 333/414 (80.4%)
# Similarity: 333/414 (80.4%)
# Gaps: 12/414 ( 2.9%)
# Score: 1364.0
#
#
#=======================================
BSNT_02801___ 1 ATGAGTGATAATATTCGCCGCTCAATGCCTTTATTTCCAATAGGAATTGT 50
|||||||||||.|||||||||||||||||.||||||||.|||||.||.||
BL03234___gln 1 ATGAGTGATAAAATTCGCCGCTCAATGCCCTTATTTCCGATAGGTATCGT 50
BSNT_02801___ 51 CATGCAGTTAACTGAGTTATCAGCAAGACAAATTCGATATTATGAGGAGA 100
|||||||.|.|||||..|.||.|||||.||||||||.|||||||||||.|
BL03234___gln 51 CATGCAGCTGACTGAACTGTCCGCAAGGCAAATTCGGTATTATGAGGAAA 100
BSNT_02801___ 101 ATGGACTGATATTTCCAGCCAGAAGTGAAGGGAATAGACGATTATTTTCA 150
||||||||.|||||||.||.|||||.||||||||.|||||.|||||||||
BL03234___gln 101 ATGGACTGGTATTTCCTGCAAGAAGCGAAGGGAACAGACGTTTATTTTCA 150
BSNT_02801___ 151 TTTCATGATGTAGATAAACTGTTAGAAATCAAGCACCTGATAGAACAAGG 200
||.||||||||||||||.|||.|.|||||.||..|..||||.||||||||
BL03234___gln 151 TTCCATGATGTAGATAAGCTGCTCGAAATTAAAGATTTGATCGAACAAGG 200
BSNT_02801___ 201 TGTAAACATGGCAGGAATTAAACAGATTCTGGCGAAAGCCGAAGCCGAGC 250
||||||||||||.||.||.|||||.|||.|.||.|||.|.|||..|
BL03234___gln 201 TGTAAACATGGCGGGGATCAAACAAATTTTCGCCAAAACAGAAAAC---- 246
BSNT_02801___ 251 CAGAACAAAAACAAAAC------GAGAAGACGAAAAAACCAATGAAACAT 294
|||||||||.||.|| ||.|||.||||||||.||..|||.||.
BL03234___gln 247 --GAACAAAAAGAAGACAAACAAGACAAGCCGAAAAAAGCAGAGAAGCAC 294
BSNT_02801___ 295 GATCTGTCCGATGACGAACTGAGACAGCTCCTGAAAAACGAGCTCATGCA 344
.|..||||.|||||.|||||||||.|.||.|||||||||||||||||.||
BL03234___gln 295 AACTTGTCGGATGAAGAACTGAGAAAACTGCTGAAAAACGAGCTCATCCA 344
BSNT_02801___ 345 AGCCGGCCGTTTTCAAAGAGGGAATACATTCCGTCAAGGCGACATGTCCC 394
|||.||||||||.||||||||||..||||||||.||.||.|||||||||.
BL03234___gln 345 AGCAGGCCGTTTCCAAAGAGGGACGACATTCCGCCAGGGAGACATGTCCA 394
BSNT_02801___ 395 GCTTCTTTCATTAA 408
|.||.|||||||||
BL03234___gln 395 GGTTTTTTCATTAA 408
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