Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00187 and BL03267

See Amino acid alignment / Visit BSNT_00187 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:50
# Commandline: needle
#    -asequence dna-align/BSNT_00187___gltX.1.5803.seq
#    -bsequence dna-align/BL03267___gltX.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00187___gltX-BL03267___gltX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00187___gltX-BL03267___gltX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00187___gltX
# 2: BL03267___gltX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1484
# Identity:    1144/1484 (77.1%)
# Similarity:  1144/1484 (77.1%)
# Gaps:          58/1484 ( 3.9%)
# Score: 4439.5
# 
#
#=======================================

BSNT_00187___      1 ATGGGAAACGAAGTACGCGTCCGTTATGCACCGAGTCCAACCGGACATTT     50
                     ||||||||||||||.||.||.||||||||.|||||.|||||.||.|||||
BL03267___glt      1 ATGGGAAACGAAGTTCGGGTTCGTTATGCGCCGAGCCCAACAGGCCATTT     50

BSNT_00187___     51 GCATATTGGAAATGCCAGAACGGCGCTTTTTAATTATTTATTTGCCCGCA    100
                     .|||||.||||||||||||||.||.||||||||||||||.||||||||.|
BL03267___glt     51 ACATATCGGAAATGCCAGAACCGCTCTTTTTAATTATTTGTTTGCCCGGA    100

BSNT_00187___    101 ATCAAGGCGGTAAGTTTATCATTCGAGTTGAGGATACAGATAAAAAGCGC    150
                     ..||||||||.||.||.|||||.||..||||.|||||.||....||||||
BL03267___glt    101 GCCAAGGCGGAAAATTCATCATCCGCATTGAAGATACGGACCGCAAGCGC    150

BSNT_00187___    151 AATATTGAGGGCGGAGAACAAAGCCAGCTGAATTATCTGAAGTGGCTAGG    200
                     ||.|||||.|||||.||.||||||||||||||.|||.|.||.|||||.||
BL03267___glt    151 AACATTGAAGGCGGGGAGCAAAGCCAGCTGAACTATTTAAAATGGCTGGG    200

BSNT_00187___    201 TATTGACTGGGATGAGAGTGTGGATGTCGGAGGAGAGTACGGCCCATACC    250
                     .||.|||||||||||.||.|||||||||||||||||.|||||.|||||||
BL03267___glt    201 CATCGACTGGGATGAAAGCGTGGATGTCGGAGGAGAATACGGACCATACC    250

BSNT_00187___    251 GTCAGTCAGAGCGTAACGATATCTATAAAGTGTACTATGAAGAGCTTCTT    300
                     |.||.||.||..|.|||||.||.||.|||...||.||.||.|||||||||
BL03267___glt    251 GCCAATCCGAAAGAAACGACATTTACAAAACATATTACGAGGAGCTTCTT    300

BSNT_00187___    301 GAAAAAGGGCTTGCTTATAAATGTTACTGTACGGAAGAAGAGCTTGAAAA    350
                     |||||||||||.||.||.|||||.|||||.|||||||||||||||||.||
BL03267___glt    301 GAAAAAGGGCTAGCCTACAAATGCTACTGCACGGAAGAAGAGCTTGAGAA    350

BSNT_00187___    351 AGAGCGTGAAGAACAGATTGCCCGCGGAGAAATGCCTCGTTATTCTGGAA    400
                     |||||||||.||||||..||||||||||||||||||.||.||.||.||.|
BL03267___glt    351 AGAGCGTGAGGAACAGGCTGCCCGCGGAGAAATGCCGCGCTACTCCGGCA    400

BSNT_00187___    401 AACACAGAGACCTGACTCAGGAAGAACAGGA-------GAAATTTATCGC    443
                     |...|.|..|..|.||..|.|||||.|||||       |||       ||
BL03267___glt    401 AGTGCCGCAATTTAACAAAAGAAGAGCAGGAAAAGCTCGAA-------GC    443

BSNT_00187___    444 TGAAGGCAGAAAACCAAGTATTCGTTTCCGCGTGCCGGAAGGAAAAATCA    493
                     ||||||.|||.|.||.||.||.||.||....|||||..||||..||.|||
BL03267___glt    444 TGAAGGAAGACAGCCGAGCATCCGCTTTAAAGTGCCTCAAGGTGAAGTCA    493

BSNT_00187___    494 TCGCCTTCAATGATATCGTAAAAGGCGAAATTTCTTTTGAATCAGATGGC    543
                     ||..|||..||||.|||||.|||||.|||||||||||||||.||||.||.
BL03267___glt    494 TCCGCTTTGATGACATCGTCAAAGGAGAAATTTCTTTTGAAACAGACGGA    543

BSNT_00187___    544 ATCGGCGACTTTGTTATTGTGAAAAAGGACGGAACGCCGACTTACAACTT    593
                     |||||||||||.||.||.|||||.||.|||||||||||.|||||||||||
BL03267___glt    544 ATCGGCGACTTCGTCATCGTGAAGAAAGACGGAACGCCTACTTACAACTT    593

BSNT_00187___    594 CGCGGTAGCGATTGATGACTACTTAATGAAAATGACACACGTGCTGCGCG    643
                     .||.||||||.|.||||||||.||||||||||||||.||.||.|||||||
BL03267___glt    594 TGCCGTAGCGGTCGATGACTATTTAATGAAAATGACGCATGTCCTGCGCG    643

BSNT_00187___    644 GTGAGGATCATATTTCTAACACACCGAAACAGATTATGATTTATCAA-GC    692
                     |.||.||.||.|||||.||.||.||.||.|||||.|||||||| ||| ||
BL03267___glt    644 GCGAAGACCACATTTCCAATACGCCAAAGCAGATCATGATTTA-CAACGC    692

BSNT_00187___    693 ATTCGGATGGGATATTCC-TCAGTTCGGACACATGACGCTGATTGTAAAC    741
                     ..|.||.||||||||.|| .|| ||.|||||.|||||..|.||.||.||.
BL03267___glt    693 CCTTGGCTGGGATATCCCGGCA-TTTGGACATATGACATTAATCGTCAAT    741

BSNT_00187___    742 GAAAGCCGTAAAAAGCTCAGTAAACGTGATGAATCCATTATTCAATTCAT    791
                     ||||||||.|||||.||.||.|||||||||||.|||||.|||||.||.||
BL03267___glt    742 GAAAGCCGCAAAAAACTGAGCAAACGTGATGAGTCCATCATTCAGTTTAT    791

BSNT_00187___    792 CGAGCAGTACAAAGAGCTTGGCTACCTGCCAGAAGCGCTGTTCAACTTTA    841
                     ||||||||||.|||||||.|||||..||||.|||||..||||.|||||.|
BL03267___glt    792 CGAGCAGTACGAAGAGCTCGGCTATTTGCCGGAAGCATTGTTTAACTTCA    841

BSNT_00187___    842 TCGGACTGCTAGGCTGGTCACCGGTTGGAGAAGAAGAGCTTTTCACAAAA    891
                     ||...||.|||||||||||.|||||.|||||||||||.||.||.||||||
BL03267___glt    842 TCACTCTTCTAGGCTGGTCGCCGGTCGGAGAAGAAGAACTGTTTACAAAA    891

BSNT_00187___    892 GAGCAGTTTATTGAAATTTTTGATGTAAATCGTTTATCTAAATCACCAGC    941
                     ||.|||||||||||.||.|||||||||||.|||||.||.|||||||||||
BL03267___glt    892 GAACAGTTTATTGAGATATTTGATGTAAACCGTTTGTCAAAATCACCAGC    941

BSNT_00187___    942 TTTGTTTGATATGCATAAGCTAAAATGGGTTAACAACCAATATGTGAAGA    991
                     ..|||||||||.||||||.||.||||||||.||||||||.||||||||.|
BL03267___glt    942 GGTGTTTGATACGCATAAACTGAAATGGGTCAACAACCAGTATGTGAAAA    991

BSNT_00187___    992 AGCTGGATCTTGATCAGGTTGTTGAACTGACGCTTCCGCATTTGCAAAAA   1041
                     |.||.||||||||||||||..|.|||.||||..|.|||||||||||||||
BL03267___glt    992 AACTTGATCTTGATCAGGTCATCGAATTGACCGTGCCGCATTTGCAAAAA   1041

BSNT_00187___   1042 GCGGGCAAAGTTGGCACT-----GAGCTTTCTGCTGAA--GAACAAGAGT   1084
                     ||||||||.|||     |     ||||||||.|  |.|  |||||.||.|
BL03267___glt   1042 GCGGGCAAGGTT-----TCAGAAGAGCTTTCAG--GCAGCGAACAGGAAT   1084

BSNT_00187___   1085 GGGTTCGTAAACTGATTTCCCTGTATCATGAGCAATTAAGCTACGGTGCG   1134
                     ||||.||.||.|||||||||||.|||||.||.||..|.||||||||.||.
BL03267___glt   1085 GGGTGCGCAAGCTGATTTCCCTATATCAGGAACAGCTGAGCTACGGCGCT   1134

BSNT_00187___   1135 GAAATTGTTGAGCTGACTGATTTGTTCTTTACGGATGAGATCGAGTATAA   1184
                     |||||.||.|||.|.||.||.||||||||||..||.||.|||.|||||||
BL03267___glt   1135 GAAATCGTCGAGTTAACAGAGTTGTTCTTTAAAGACGATATCCAGTATAA   1184

BSNT_00187___   1185 TCAAGAAGCGAAAGCTGTTCTGGAAGAAGAACAGGTTCCTGAAGTGCTCA   1234
                     ||..|||||.|.|.|.|||.|.||||||||.||||||||.||||||||..
BL03267___glt   1185 TCGTGAAGCAAGAACAGTTTTAGAAGAAGAGCAGGTTCCGGAAGTGCTTC   1234

BSNT_00187___   1235 GCACATTCGCAGCGAAGCTTGAAGAGCTTGAGGAGTTCACTCCGGATAAC   1284
                     ||..|||.||.|..||||||||..|||||||...|||.||..|.|||.|.
BL03267___glt   1235 GCGTATTTGCCGAAAAGCTTGAGCAGCTTGACTCGTTTACGGCAGATGAG   1284

BSNT_00187___   1285 ATCAAAGCATCAATCAAAGCAGTGCAGAAAGAAACTGGCCATAAAGGGAA   1334
                     |||||.|||||.||||||||.||.||.||||||||.||.|||||||||||
BL03267___glt   1285 ATCAAGGCATCCATCAAAGCCGTTCAAAAAGAAACAGGACATAAAGGGAA   1334

BSNT_00187___   1335 AAAACTGTTTATGCCGATTCGTGTTGCTGTAACAGGGCAAACTCACGGTC   1384
                     |||.||||||||||||||.||.||.||....|||||.||.||.|||||||
BL03267___glt   1335 AAAGCTGTTTATGCCGATCCGCGTAGCGACGACAGGCCAGACCCACGGTC   1384

BSNT_00187___   1385 CGGAACTGCCGCAATCAATTGAATTGATCGGTAAAGAGACTGCAATTCAG   1434
                     |.||||||||.||.||.||||||||..|.||.|||||          ||.
BL03267___glt   1385 CTGAACTGCCTCAGTCCATTGAATTATTGGGGAAAGA----------CAC   1424

BSNT_00187___   1435 CGTTTAAAAA-------ATATC---------TAA   1452
                     |||||.||||       |||.|         |||
BL03267___glt   1425 CGTTTTAAAACGGCTGCATAACATTATTCAATAA   1458


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