Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00192 and BL03268
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence dna-align/BSNT_00192___cysE.1.5803.seq
# -bsequence dna-align/BL03268___cysE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00192___cysE-BL03268___cysE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00192___cysE-BL03268___cysE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00192___cysE
# 2: BL03268___cysE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 671
# Identity: 495/671 (73.8%)
# Similarity: 495/671 (73.8%)
# Gaps: 37/671 ( 5.5%)
# Score: 1818.5
#
#
#=======================================
BSNT_00192___ 1 GTGTTTTTTAGAATGCTCAAAGAAGACATTGATACTGTGTTCGATCAAGA 50
|||||.||||.||||||.||||||||..|.|||...||.||.||.|||||
BL03268___cys 1 GTGTTCTTTAAAATGCTGAAAGAAGATGTAGATGTCGTATTTGACCAAGA 50
BSNT_00192___ 51 TCCCGCAGCAAGAAGCTATTTTGAAGTGATTTTAACTTATTCCGGTTTAC 100
|||.||.||.||||||||..|||||||.||.|||||||||||.|||||.|
BL03268___cys 51 TCCGGCTGCGAGAAGCTACATTGAAGTCATCTTAACTTATTCAGGTTTGC 100
BSNT_00192___ 101 ATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTT 150
|||||||||||||.|||||.|||||||||||||||||||||.|||||...
BL03268___cys 101 ATGCTATATGGGCACATCGAATTGCACATGCTTTATATAAAAGAAAAAGG 150
BSNT_00192___ 151 TATTTCCTTGC----ACGCTTTATATCTCAAGTAAGCCGATTTTTTACCG 196
|.||||.|.|| .|| ||.||||||.|...|||.||.|||||.|
BL03268___cys 151 TTTTTCATCGCCAGAGCG----ATCTCTCAAATCGCCCGCTTCTTTACGG 196
BSNT_00192___ 197 GGATAGAAATCCACCCCGGCGCTACAATCGGGAGAAGATTTTTCATAGAC 246
|.||.|||||.|||||.||.||.|..|||||.||.|||||||||||.||.
BL03268___cys 197 GAATCGAAATTCACCCGGGTGCCAAGATCGGCAGGAGATTTTTCATTGAT 246
BSNT_00192___ 247 CACGGCATGGGGGTTGTCATTGGGGAGACATGTGAAATCGGCAATAACGT 296
|||||||||||||||||.||.||.||.||.|||||.|||||.||.||.||
BL03268___cys 247 CACGGCATGGGGGTTGTGATCGGCGAAACCTGTGAGATCGGAAACAATGT 296
BSNT_00192___ 297 AACCGTTTTTCAGGGGGTTACCCTCGGGGGAACGGGGAAAGAAAAGGGAA 346
.||.|||||||||||.||.||.||.||||||||.||.||||||||.||.|
BL03268___cys 297 CACGGTTTTTCAGGGCGTGACGCTTGGGGGAACAGGAAAAGAAAAAGGCA 346
BSNT_00192___ 347 AAAGGCACCCAACGATTAAAGATGACGCATTGATAGCCACAGGCGCTAAA 396
|||||||.||.||.||..|.||.||.||..||||..|.|||||.||||||
BL03268___cys 347 AAAGGCATCCGACAATCGAGGACGATGCCCTGATCTCAACAGGGGCTAAA 396
BSNT_00192___ 397 GTGCTCGGTTCTATTACGGTCGGTGAAGGCTCAAAGATTGGCGCTGGTTC 446
|||||.||.||.|||||.|||||...|||..|.||.||.||.||.||.||
BL03268___cys 397 GTGCTTGGATCCATTACAGTCGGAAGAGGGGCGAAAATCGGTGCAGGCTC 446
BSNT_00192___ 447 AGTAGTGCTGCATGATGTTCCTGATTTTTCAACAGTTGTCGGTATCCCTG 496
.||.||.|||||.|||||.|||||.|..||.||.||||||||.|||||.|
BL03268___cys 447 CGTCGTCCTGCACGATGTGCCTGAATGCTCCACCGTTGTCGGCATCCCGG 496
BSNT_00192___ 497 GACGGGTAGTTGTACAAAATGGCAAGAAAGTAAGACGCGATTTAAACCAT 546
|.|||||.||.||||||||.||.||||||.|.||||||||.||.||.||.
BL03268___cys 497 GCCGGGTCGTCGTACAAAACGGAAAGAAAATCAGACGCGACTTGAATCAC 546
BSNT_00192___ 547 CAGGATTTGCCCGATCCAGTTGCTGACCGCTTTA-AGTCTTTGGAACAGC 595
|||||||||||.|||||.||.|||||||||||.| || ..||||||.|
BL03268___cys 547 CAGGATTTGCCGGATCCGGTGGCTGACCGCTTCAGAG-AATTGGAAAA-- 593
BSNT_00192___ 596 AGATTTTAG--AGCTGAAGGCAGAACTTGAAGAC---AGAAAAGAAAGGA 640
.||..|.|| |||||||...|||.|| | ||||||||||||
BL03268___cys 594 CGAAATCAGGCAGCTGAAACAAGAGCT------CCGGAGAAAAGAAAGG- 636
BSNT_00192___ 641 TCAATCAAAAATGA------- 654
.||.||||
BL03268___cys 637 ------GAAGATGAGCTGTGA 651
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