Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04461 and BL03285

See Amino acid alignment / Visit BSNT_04461 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence dna-align/BSNT_04461___dps.1.5803.seq
#    -bsequence dna-align/BL03285___dps.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04461___dps-BL03285___dps.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04461___dps-BL03285___dps.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04461___dps
# 2: BL03285___dps
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity:     334/451 (74.1%)
# Similarity:   334/451 (74.1%)
# Gaps:          26/451 ( 5.8%)
# Score: 1236.0
# 
#
#=======================================

BSNT_04461___      1 ATGTCAGAACAATTGATTCAAGCA---GTGAACAAACAAGTAGCCAACTG     47
                     |||||.|||.||||||   |||||   ||.|||||||||||.||.|||||
BL03285___dps      1 ATGTCTGAAAAATTGA---AAGCAACCGTCAACAAACAAGTCGCGAACTG     47

BSNT_04461___     48 GACAGTCATGTATGTGAAACTACATAATTATCACTGGTATGTGAAAGGGA     97
                     |||.||..|.||||||||.||||||||||||||.||||||||||||||||
BL03285___dps     48 GACCGTTCTATATGTGAAGCTACATAATTATCATTGGTATGTGAAAGGGA     97

BSNT_04461___     98 AAGATTTCTTCACTCTTCATGAAAAGTTTGAGGAGCTGTACAACGAAACG    147
                     ||||||||||.||.||.||||||||.||.||.|||||.||||..|||.||
BL03285___dps     98 AAGATTTCTTTACGCTGCATGAAAAATTCGAAGAGCTTTACACAGAAGCG    147

BSNT_04461___    148 GCAACTTATATTGATGACTTAGCAGAACGTCTTTTGGCGCTGAACGGAAA    197
                     |||....||||.|||||.||.||.|||||.||.|||||..|..|.||...
BL03285___dps    148 GCAGAGCATATCGATGATTTGGCTGAACGCCTATTGGCCATACAGGGCTC    197

BSNT_04461___    198 ACCGATTGCAACAATGAAGGAATCCTTAGAAACGGCTTCTGTC-------    240
                     .|||.|.|.|||.||||||||||.|.|.||||       ||||       
BL03285___dps    198 TCCGGTCGGAACGATGAAGGAATGCCTGGAAA-------TGTCCGCGATT    240

BSNT_04461___    241 AAAGAAGCTGCTGGAAATGAAACAGCTGAACAAATGGTTCAAAGCGTATA    290
                     ||||||||.|..||||..||..|.||||||||||||||.||||...|.||
BL03285___dps    241 AAAGAAGCGGACGGAAGCGAGTCTGCTGAACAAATGGTGCAAAATATTTA    290

BSNT_04461___    291 TGATGA---TTTCACAGTCATCGCGGAAGAGCTGAAAAACGGCATGGATT    337
                     |.||||   |||.||.|   |.||.||.||||||||||.|||.|||||..
BL03285___dps    291 TAATGACTTTTTAACGG---TGGCTGAGGAGCTGAAAAGCGGAATGGAGC    337

BSNT_04461___    338 TAGCTGATGAAGTCGGTGACGAAACAACAGGGGACATGCTTCTTGCGATC    387
                     |.||.|||||||||...||.|||||.||.||.||||||||.||.|||||.
BL03285___dps    338 TTGCCGATGAAGTCAACGATGAAACGACGGGAGACATGCTGCTCGCGATT    387

BSNT_04461___    388 CATCAAAATATTGAAAAACATAACTGGATGCTAAAAGCTTACCTAGGTTA    437
                     ||||||...||.||||||||.|||||||||||.|||||.|||.||||.||
BL03285___dps    388 CATCAATCGATCGAAAAACACAACTGGATGCTGAAAGCCTACTTAGGGTA    437

BSNT_04461___    438 A    438
                     |
BL03285___dps    438 A    438


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