Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04453 and BL03293
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence dna-align/BSNT_04453.1.5803.seq
# -bsequence dna-align/BL03293___ytlA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04453-BL03293___ytlA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04453-BL03293___ytlA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04453
# 2: BL03293___ytlA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1042
# Identity: 728/1042 (69.9%)
# Similarity: 728/1042 (69.9%)
# Gaps: 86/1042 ( 8.3%)
# Score: 2390.5
#
#
#=======================================
BSNT_04453 1 GTGAACAGATGGTTAAGGCTGGGCTTCGCCTGTGTCGGCAGTATCTTTC- 49
.|||| |.|.|| ||| |.|..|...|.||||.|||
BL03293___ytl 1 TTGAA---ACGTTT---------CTT----TTTTACCATATTATCCTTCA 34
BSNT_04453 50 ------TGATGTTCGCCCTGGCGGCTTGCAAGCAG-GAAGAAACGCTCAC 92
||.||||...|||.|| |.||.||.| |.|.|||.| ||
BL03293___ytl 35 TCATGATGCTGTTTATCCTCGC----TTCATGCGGCGGACAAAAG---AC 77
BSNT_04453 93 CAAAGTCAAAG-------TAGCTGAAGTGACCCATTCAATTTTTTACGCA 135
|.| |||| |.||.||||||||||.|||..||||.||..|.
BL03293___ytl 78 CGA----AAAGATCCGTCTGGCGGAAGTGACCCGTTCCGTTTTCTATACG 123
BSNT_04453 136 CCTTTATATGTTG-CTGAGTCTAAAGGTTTTTTTAAGGAAGAAGGGCTTG 184
|||||||||.|.| ||.| |||.|||||||||||||.||||||||.||||
BL03293___ytl 124 CCTTTATATATCGCCTTA-TCTGAAGGTTTTTTTAAAGAAGAAGGCCTTG 172
BSNT_04453 185 ATGTCGATGTGAATACGACCTGGGGCGGAGATAAAACGATGACATCGCTT 234
||||.||..||||.|||||||||||||||||||||||||||||..|.|||
BL03293___ytl 173 ATGTTGAACTGAAAACGACCTGGGGCGGAGATAAAACGATGACTGCCCTT 222
BSNT_04453 235 CTTTCCAACGGCTCCGACATCGCGCTTGTCGGGTCAGAAACATCTATTTA 284
||.||.||||||.||||.||.|||||||||||.||.|||||.||.||.||
BL03293___ytl 223 CTGTCAAACGGCGCCGATATTGCGCTTGTCGGCTCGGAAACGTCAATATA 272
BSNT_04453 285 TGTCGAAGCGCAAGGGGCTAAAGATCCCGTCATTAATTTCGCCCAGCTGA 334
.||..|.||.||.||.||.|..|||||.||.||||||||.||.|||||.|
BL03293___ytl 273 CGTAAATGCCCAGGGCGCAAGCGATCCGGTGATTAATTTTGCACAGCTTA 322
BSNT_04453 335 CTCAGACAGACGGAACGTTTCTTGTCGCGAGAGAA-GATGTTGAACACTT 383
|.|||||.||||||||.||.||.|||.|.|| ||| |||...|..||.||
BL03293___ytl 323 CCCAGACGGACGGAACCTTCCTCGTCTCCAG-GAACGATTCGGGGCATTT 371
BSNT_04453 384 CGACTGGGATCAGCTGAAAGGAAAAACGTTTCTCGGTCAGCGAAAAGGCG 433
|..|||||||.|..||||||..||||||||.||.||.|||||.|||||||
BL03293___ytl 372 CAGCTGGGATGATTTGAAAGACAAAACGTTCCTTGGCCAGCGCAAAGGCG 421
BSNT_04453 434 GCATGCCGCAAATGGTCGGCGAGTATGTACTGAACAAACATAA---GATT 480
|.||||||||.||||..|||||.|.|||.|| ||||||.|| .||.
BL03293___ytl 422 GAATGCCGCAGATGGCAGGCGAATTTGTCCT---CAAACAGAAAGGCATC 468
BSNT_04453 481 GACCCGCATAAGGATATAGACCTCATCCAGAAC-ATAGACTTCGCCAATA 529
||.||..|.||||||.|.||.||.||||| ||| ||.||.|||||.||||
BL03293___ytl 469 GATCCTAAAAAGGATGTGGATCTGATCCA-AACGATTGATTTCGCGAATA 517
BSNT_04453 530 TTGCCAA-TGCGTTTGCTTCTGGAACCGGTGAGTATGTACAGCTCTTTGA 578
|.||.|| .|| |||||.|||||.||.|||||.|||||.||..|.|||||
BL03293___ytl 518 TCGCAAACAGC-TTTGCATCTGGTACAGGTGATTATGTTCAATTATTTGA 566
BSNT_04453 579 ACCGCAGGCTTCTCTCTTTGAGAAAAAAGGCATCGGCCATATCGTGGCTT 628
|||.|||||.||..|.|||||.|.|.||||||||||||..||.||.||.|
BL03293___ytl 567 ACCCCAGGCATCCATTTTTGAAAGAGAAGGCATCGGCCGCATTGTCGCCT 616
BSNT_04453 629 CATTCGGAGAAGAATCAGG-AGAGGTTCCTTATACGACTTTTATGGCGAA 677
|.||||||.|||||||.|| .|| .|.||.|||||.|||||||||||.||
BL03293___ytl 617 CCTTCGGAAAAGAATCGGGCCGA-ATCCCATATACAACTTTTATGGCCAA 665
BSNT_04453 678 ACAAAGCTATTTGAAGAAAAATGAAGACACAGCCGTC---AAGTTTACAA 724
||||||||||||.|.||||||..|||| |||.||| |||||.||..
BL03293___ytl 666 ACAAAGCTATTTAACGAAAAACAAAGA---AGCGGTCGAAAAGTTCACCC 712
BSNT_04453 725 AAGCCATTTATAAGGCGCAGCAGTGGGTTGAAAATCATTCTGCGAAGGAC 774
..||..||||.||.|||||||||||||||||.|..||.|||||.||.||
BL03293___ytl 713 GCGCGGTTTACAAAGCGCAGCAGTGGGTTGAGACGCACTCTGCAAAAGA- 761
BSNT_04453 775 ATCA-CAGATGCCATTAAAGATGAATTTGATGATACCGACC---CAGACG 820
|.|| |.||...||||.|||||.|.|||.|.||||||||.| || .
BL03293___ytl 762 AGCAGCCGAAAGCATTCAAGATTATTTTAAAGATACCGAGCTTTCA---A 808
BSNT_04453 821 TCATCGAAACATCCATTGAACGCTATAAAAAACAGCATTCATATTCACCA 870
||||.|.|.|.||.||.|||||.||||||.||||.||.||.|.|.|.|..
BL03293___ytl 809 TCATTGCATCTTCAATCGAACGGTATAAACAACAACAGTCTTTTGCTCTT 858
BSNT_04453 871 GACCCTCTGCTTAACGAAAAAGAATGGGAGCTTCTCCAAACCATTATGGA 920
||.|||.|..|..|.||||||||||||.|.|..||.||||||||.|||||
BL03293___ytl 859 GATCCTGTTTTGGATGAAAAAGAATGGAACCAGCTTCAAACCATCATGGA 908
BSNT_04453 921 TAAATCGGGAGAACTGCCGAAGCACATTC--CATACAATCAGCTTGTAAA 968
|.||.|.||.||.||||||||||.||..| |||..|| ||||.||.||
BL03293___ytl 909 TGAAGCCGGCGAGCTGCCGAAGCGCACCCCTCATCAAA--AGCTGGTCAA 956
BSNT_04453 969 TAAAGAAATTGCTGAAAAAGTCACCTCGGAGAAA-----TAG 1005
||.|.|.||.||.|||||.||||| |.||| |||
BL03293___ytl 957 TACAAAGATCGCCGAAAAGGTCAC-----AAAAAATTACTAG 993
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