Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00139 and BL03311
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:49
# Commandline: needle
# -asequence dna-align/BSNT_00139___yacF.1.5803.seq
# -bsequence dna-align/BL03311___dus1.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00139___yacF-BL03311___dus1.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00139___yacF-BL03311___dus1.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00139___yacF
# 2: BL03311___dus1
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1003
# Identity: 829/1003 (82.7%)
# Similarity: 829/1003 (82.7%)
# Gaps: 2/1003 ( 0.2%)
# Score: 3437.0
#
#
#=======================================
BSNT_00139___ 1 TTGTTCAAAATTGGAGATATTCAATTGAAAAACCGGGTTGTGCTCGCACC 50
.||||.|||||.||.|||||..||||.||||||.|||||||||||||.||
BL03311___dus 1 ATGTTTAAAATCGGTGATATAGAATTAAAAAACAGGGTTGTGCTCGCGCC 50
BSNT_00139___ 51 TATGGCTGGTGTCTGCAACTCTGCGTTCAGATTGACTGTAAAGGAATTCG 100
.|||||.||||||||||||||.||.|||.|.|||||.||.||||||||||
BL03311___dus 51 GATGGCCGGTGTCTGCAACTCAGCCTTCCGCTTGACGGTTAAGGAATTCG 100
BSNT_00139___ 101 GAGCCGGATTGGTATGCGCTGAAATGGTCAGTGACAAAGCGATCCTTTAC 150
||||.||.|||||.|||||.|||||||||||.||.||.||||||||||||
BL03311___dus 101 GAGCGGGTTTGGTCTGCGCCGAAATGGTCAGCGATAAGGCGATCCTTTAC 150
BSNT_00139___ 151 AACAATGCAAGAACAATGGGTATGCTTTATATTGATGAACGTGAGAAACC 200
||.|||||.|.|||.|||||.|||||||||||.|||||||||||.|||||
BL03311___dus 151 AATAATGCGAAAACGATGGGAATGCTTTATATCGATGAACGTGAAAAACC 200
BSNT_00139___ 201 ACTGAGCCTTCAAATTTTCGGAGGAAAAAAGGAAACCCTTGTGGAAGCGG 250
.||.|||||.||.||.|||||.|||.||||.|||||.|||||.|||||||
BL03311___dus 201 GCTCAGCCTGCAGATCTTCGGCGGAGAAAAAGAAACGCTTGTCGAAGCGG 250
BSNT_00139___ 251 CGAAGTTTGTAGACCAAAACACAACTGCTGATATCATTGATATTAACATG 300
||||||||||.|||||||||||||||||.|||||.||||||||.||||||
BL03311___dus 251 CGAAGTTTGTTGACCAAAACACAACTGCGGATATTATTGATATAAACATG 300
BSNT_00139___ 301 GGATGTCCCGTGCCGAAGATTACAAAATGCGATGCGGGAGCCAAATGGCT 350
||||||||.|||||.|||||.||||||||.|||||.||||||||||||||
BL03311___dus 301 GGATGTCCAGTGCCAAAGATCACAAAATGTGATGCAGGAGCCAAATGGCT 350
BSNT_00139___ 351 TCTCGATCCTGATAAGATTTACGAAATGGTTTCTGCAGTAGTGGATGCTG 400
.||.|||||..||||.|||||.|||||||||||.||.||.|||||.||||
BL03311___dus 351 GCTTGATCCGAATAAAATTTATGAAATGGTTTCAGCTGTCGTGGAGGCTG 400
BSNT_00139___ 401 TTAATAAGCCAGTTACAGTGAAAATGAGAATGGGCTGGGATGAAGACCAC 450
||.|.|||||.||.||.|||||||||||||||||.|||||.||||||||.
BL03311___dus 401 TTGACAAGCCTGTGACCGTGAAAATGAGAATGGGTTGGGACGAAGACCAT 450
BSNT_00139___ 451 ATTTTCGCAGTGAAAAATGCACAG-GCTGTAGAACGTGCGGGCGGTAAAG 499
||.||.||.||..|.||||| .|| |||||||||||.||.|||||.||||
BL03311___dus 451 ATCTTTGCTGTTGAGAATGC-GAGAGCTGTAGAACGAGCAGGCGGAAAAG 499
BSNT_00139___ 500 CAGTGGCGCTTCACGGCCGTACGAGAGTGCAGATGTACGAAGGAACGGCA 549
|.||.||.||||||||.||.||..|.|||||.|||||||||||||||||.
BL03311___dus 500 CGGTCGCTCTTCACGGACGGACCCGCGTGCAAATGTACGAAGGAACGGCG 549
BSNT_00139___ 550 AACTGGGATATCATCAAAGAAGTAAAACAATCAGTATCGATTCCGGTTAT 599
|||||||||||.|||||||||||.||.||.||.||.||.||.||.||.||
BL03311___dus 550 AACTGGGATATTATCAAAGAAGTGAAGCAGTCCGTTTCAATCCCTGTAAT 599
BSNT_00139___ 600 CGGAAACGGCGATGTTAAGACACCGCAGGATGCTAAGCGTATGCTCGATG 649
|||||||||.|||||.||.||.|||||.|||||.||.||.|||||.||||
BL03311___dus 600 CGGAAACGGTGATGTCAAAACTCCGCAAGATGCAAAACGCATGCTTGATG 649
BSNT_00139___ 650 AGACAGGAGTAGACGGGGTCATGATCGGACGCGCTGCATTGGGTAACCCG 699
|.|||||.||.|||||.|||||||||||.||.||.||..|||||||||||
BL03311___dus 650 AAACAGGGGTGGACGGCGTCATGATCGGCCGTGCAGCGCTGGGTAACCCG 699
BSNT_00139___ 700 TGGATGATTTACCGTACGGTTCAGTATCTTGAAACAGGTAAATTAAAAGA 749
|||||||||||||||||||||||.|||.|.||||||||..||||.|||||
BL03311___dus 700 TGGATGATTTACCGTACGGTTCACTATTTGGAAACAGGCGAATTGAAAGA 749
BSNT_00139___ 750 AGAGCCGCAAGTACGCGAAAAAATGGCCGTATGCAAACTGCATCTTGACC 799
.||||||.||||.||.||.|||||..|.||.||||||||.||.|||||||
BL03311___dus 750 TGAGCCGAAAGTGCGTGAGAAAATTTCTGTCTGCAAACTTCACCTTGACC 799
BSNT_00139___ 800 GCCTGATTGACTTAAAAGGTGAAAACGTAGCGGTAAGAGAAATGAGAAAG 849
|..|.||.|...|.|||||.|||||.||.|||||..|.||||||||||||
BL03311___dus 800 GATTAATCGGGCTGAAAGGCGAAAATGTTGCGGTTCGCGAAATGAGAAAG 849
BSNT_00139___ 850 CACGCTGCATGGTATCTGAAAGGCGTGAAAGGCAATGCGAACGTTCGTAA 899
|||||.||.||||||||.||||||.|.|.|||.||.||.||.||.||.||
BL03311___dus 850 CACGCAGCCTGGTATCTAAAAGGCATAAGAGGAAACGCAAAGGTCCGGAA 899
BSNT_00139___ 900 TGAAATCAATCATTGCGAGACGAGAGAAGAGTTTGTACAGCTTTTAGATG 949
|||||||||.||||||||.||||||||.|||.|.||.|||||||||||.|
BL03311___dus 900 TGAAATCAACCATTGCGAAACGAGAGATGAGCTCGTTCAGCTTTTAGACG 949
BSNT_00139___ 950 CATTTACGGTTGAAGTTGAGGCAAAAGAGCTTCAAAATGCAAAAGTAGGA 999
|.||||||.||||||..|||||||||||||||||..||||||||||||||
BL03311___dus 950 CGTTTACGATTGAAGCCGAGGCAAAAGAGCTTCAGGATGCAAAAGTAGGA 999
BSNT_00139___ 1000 TAA 1002
|||
BL03311___dus 1000 TAA 1002
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