Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01923 and BL03329
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:27
# Commandline: needle
# -asequence dna-align/BSNT_01923___spxA.1.5803.seq
# -bsequence dna-align/BL03329___spxA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01923___spxA-BL03329___spxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01923___spxA-BL03329___spxA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01923___spxA
# 2: BL03329___spxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 401
# Identity: 324/401 (80.8%)
# Similarity: 324/401 (80.8%)
# Gaps: 10/401 ( 2.5%)
# Score: 1299.5
#
#
#=======================================
BSNT_01923___ 1 ATGGTTACACTATACACATCACCAAGCTGTACTTCATGCAGAAAGGCGAG 50
|||||||||.||||.|||||.||||||||.||.||.||||||||||||.|
BL03329___spx 1 ATGGTTACATTATATACATCCCCAAGCTGCACGTCTTGCAGAAAGGCGCG 50
BSNT_01923___ 51 AGCGTGGCTCGAGGAGCACGATATTCCATTTGTAGAAAGAAACATTTTCT 100
.||.|||||.||.||.||.||||||||.|||...||||||||.|||||.|
BL03329___spx 51 CGCATGGCTAGAAGAACATGATATTCCGTTTACGGAAAGAAATATTTTTT 100
BSNT_01923___ 101 CTGAACCTTTATCAATTGATGAAATAAAACAAATTCTTCGAATGACTGAG 150
|.||.||||||||||||||||||||||||.|.|||.|.||||||||.|||
BL03329___spx 101 CAGAGCCTTTATCAATTGATGAAATAAAAGAGATTTTACGAATGACGGAG 150
BSNT_01923___ 151 GATGGAACAGATGAAATCATCTCAACCCGTTCAAAAGTATTCCAAAAACT 200
||.||||||||.|||||.||.|||||.|||||.|||||.||||||||.||
BL03329___spx 151 GACGGAACAGACGAAATTATTTCAACTCGTTCCAAAGTGTTCCAAAAGCT 200
BSNT_01923___ 201 GAATGTGAACGTTGAATCTATGCCGCTGCAAGATTTGTACC-GCTTGATC 249
|||.||.|||.|||||.|.||||||||.|||||..|||||| || |.|||
BL03329___spx 201 GAACGTCAACCTTGAAACAATGCCGCTTCAAGAGCTGTACCAGC-TCATC 249
BSNT_01923___ 250 AACGAGCATCCAGGG----TTGCTTCGCCGTCCGATCATCATTGACGAAA 295
||.||.||||| ||| ||| |||||||||||||||||||||||||
BL03329___spx 250 AATGAACATCC-GGGCCTTTTG---CGCCGTCCGATCATCATTGACGAAA 295
BSNT_01923___ 296 AACGTTTGCAGGTAGGATATAACGAAGACGAAATCAGACGTTTCCTGCCA 345
|.||..|||||||.|||||.|||||||||||||||.|.||.||||||||.
BL03329___spx 296 AGCGCCTGCAGGTTGGATACAACGAAGACGAAATCCGCCGCTTCCTGCCG 345
BSNT_01923___ 346 AGAAAAGTTCGCTCTTTCCAATTAAGAGAAGCACAGCGTTTGGCAAACTA 395
.|.|||||.|||.|.|||||..|..|.|||||.||||||.|.||||||||
BL03329___spx 346 CGCAAAGTGCGCACATTCCAGCTTCGTGAAGCGCAGCGTCTTGCAAACTA 395
BSNT_01923___ 396 A 396
|
BL03329___spx 396 A 396
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