Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05418 and BL03352

See Amino acid alignment / Visit BSNT_05418 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:33
# Commandline: needle
#    -asequence dna-align/BSNT_05418___tuaD.1.5803.seq
#    -bsequence dna-align/BL03352___tuaD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05418___tuaD-BL03352___tuaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05418___tuaD-BL03352___tuaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05418___tuaD
# 2: BL03352___tuaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1335
# Identity:    1238/1335 (92.7%)
# Similarity:  1238/1335 (92.7%)
# Gaps:           3/1335 ( 0.2%)
# Score: 5814.0
# 
#
#=======================================

BSNT_05418___      1 ATGTTGAAAAGAATTGCTGTCATTGGGACGGGATATGTCGGGCTGGTGTC     50
                        |||||||||||.|||||||||||.|||||||||||||||||||||||
BL03352___tua      1 ---TTGAAAAGAATCGCTGTCATTGGAACGGGATATGTCGGGCTGGTGTC     47

BSNT_05418___     51 TGGAACTTGTTTTGCTGAAGTGGGAAACTCAGTTGTCTGCTGTGATATCG    100
                     |||||||||||||||.||||||||||||||.|||||||||||.|||||.|
BL03352___tua     48 TGGAACTTGTTTTGCCGAAGTGGGAAACTCGGTTGTCTGCTGCGATATTG     97

BSNT_05418___    101 ACGCTGAAAAAATAAGAGGACTCTTAGCCGGAGTAATGCCGATTTATGAG    150
                     |.||||||||||||||||||||||.|||||||||.||||||||||||||.
BL03352___tua     98 ATGCTGAAAAAATAAGAGGACTCTCAGCCGGAGTGATGCCGATTTATGAA    147

BSNT_05418___    151 AACGGCCTAAAAGAGCTTGTGGATAAAAACGTAAACGAAAATCGCTTATT    200
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BL03352___tua    148 AACGGCCTAAAAGAACTTGTGGATAAAAACGTAAACGAAAATCGCTTATT    197

BSNT_05418___    201 TTTCTCTACTGATATTCCAAAAGCGATTGAAGAAGCTGAGATTATTTATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL03352___tua    198 TTTCTCTACTGATATTCCAAAAGCGATTGAAGAAGCTGAGATTATTTATA    247

BSNT_05418___    251 TTGCAGTCGGAACACCGATGTCGGAAACAGGGGAAGCAGATCTGACATTT    300
                     ||||||||||.||||||||||||||||||||||||||.||||||||||||
BL03352___tua    248 TTGCAGTCGGTACACCGATGTCGGAAACAGGGGAAGCGGATCTGACATTT    297

BSNT_05418___    301 GTTAAATCTGTTGCCGAAATGATCGGAAAGCATCTGAACGGCTATAAAGT    350
                     ||||||||.|||||||||||||||||.|||||.|||||||||||||||||
BL03352___tua    298 GTTAAATCCGTTGCCGAAATGATCGGGAAGCACCTGAACGGCTATAAAGT    347

BSNT_05418___    351 CATCGTCAACAAAAGCACTGTCCCTGTTGGCACTGGAAAGCTCATACAAG    400
                     ||||||||||||||||||||||||||||||.||.|||||||||.||||||
BL03352___tua    348 CATCGTCAACAAAAGCACTGTCCCTGTTGGAACAGGAAAGCTCGTACAAG    397

BSNT_05418___    401 GTATCATACAACGTATTTCAAAAGGAGAAGTTCCTTTCGACGTCGTTTCG    450
                     ..||.|||.||||.|.|||||||||.|||.|.||||||||||||||.|||
BL03352___tua    398 CCATTATAGAACGCAATTCAAAAGGGGAATTCCCTTTCGACGTCGTGTCG    447

BSNT_05418___    451 AATCCCGAATTCCTTCGTGAAGGAACAGCTATTTACGATACGATGAATAT    500
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BL03352___tua    448 AATCCGGAATTCCTTCGTGAAGGAACAGCTATTTACGATACGATGAATAT    497

BSNT_05418___    501 GGAAAGAGCCGTCATCGGCGCGACAAGCGAAAGGGCTGCTGCGATAATTG    550
                     |||||||||.||||||||||||||||||||||.|||||||||.||.||||
BL03352___tua    498 GGAAAGAGCAGTCATCGGCGCGACAAGCGAAAAGGCTGCTGCCATTATTG    547

BSNT_05418___    551 AAGAACTTCATAAGCCTTTTCAAACGAAAATTGTCAAGTCTAACCTTGAA    600
                     ||||.|||||||||||.||||||||||||||.||||||||||||||||||
BL03352___tua    548 AAGAGCTTCATAAGCCATTTCAAACGAAAATCGTCAAGTCTAACCTTGAA    597

BSNT_05418___    601 AGTGCAGAAATGATTAAATATGCTGCAAATGCATTTTTGGCTACAAAGAT    650
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BL03352___tua    598 AGTGCAGAAATGATTAAATACGCTGCAAATGCATTTTTGGCTACAAAGAT    647

BSNT_05418___    651 CTCGTTCATTAATGATATCGCGAATATTTGCGAAAGAGTCGGAGCTGACG    700
                     ||||||||||||||||||||||||||||||||||||.|||||||||||.|
BL03352___tua    648 CTCGTTCATTAATGATATCGCGAATATTTGCGAAAGGGTCGGAGCTGATG    697

BSNT_05418___    701 TATCAAAGGTGTCTGAAGGTGTCGGACTCGACAGCAGAATCGGCAATAAA    750
                     ||||.||||||||||||||.|||||||||||||||||||||||||.||||
BL03352___tua    698 TATCCAAGGTGTCTGAAGGCGTCGGACTCGACAGCAGAATCGGCAGTAAA    747

BSNT_05418___    751 TTTTTAAAAGCCGGAATCGGCTTTGGTGGCTCCTGCTTCCCTAAAGATAC    800
                     ||||||||||||||||||||||||||.|||||.||||||||||||||.||
BL03352___tua    748 TTTTTAAAAGCCGGAATCGGCTTTGGCGGCTCTTGCTTCCCTAAAGACAC    797

BSNT_05418___    801 AATGGCTTTATTGCATATCGCGAAGTCAGCCGGCTACCCTTTTAAAATGA    850
                     .||||||||||||||.|||||||||||||.|||.||.|||||||||.|||
BL03352___tua    798 GATGGCTTTATTGCAAATCGCGAAGTCAGTCGGTTATCCTTTTAAATTGA    847

BSNT_05418___    851 TTGAAGCCGTCATCGAGACGAACCAAAAGCAGCGTGCCCACATTGTGCAG    900
                     |||||||.||||||||||||||.|||||||||||.||||||||||||||.
BL03352___tua    848 TTGAAGCTGTCATCGAGACGAATCAAAAGCAGCGCGCCCACATTGTGCAA    897

BSNT_05418___    901 AAGCTCCTTGATGTGTTCGGCGATTTAAACGGCAAGACCATTTCAATTCT    950
                     ||||||||||||||||||||||||||||||||||.|||||||||..||||
BL03352___tua    898 AAGCTCCTTGATGTGTTCGGCGATTTAAACGGCATGACCATTTCGGTTCT    947

BSNT_05418___    951 TGGTTTGGCATTCAAGCCTAATACAAACGATATGCGCTCAGCTCCATCTC   1000
                     |||..|||||||||||||.|||||.||||||||||||||.||.||.||||
BL03352___tua    948 TGGGCTGGCATTCAAGCCGAATACTAACGATATGCGCTCGGCGCCGTCTC    997

BSNT_05418___   1001 TGGATGTCATTCCGACGCTGAGAAGTCTTGGTGCTAAAGTCAAAGCGTTT   1050
                     |||||||||||||||.|||||||||.||.|||||||||||||||||||||
BL03352___tua    998 TGGATGTCATTCCGATGCTGAGAAGCCTCGGTGCTAAAGTCAAAGCGTTT   1047

BSNT_05418___   1051 GATCCGATTGCGGTTCCTGAAGCAGAAAAGATTCTGGGCGATCAAGCTGT   1100
                     |||||||||||.||.|||||||||||||||.||||.|||||||||||.||
BL03352___tua   1048 GATCCGATTGCTGTACCTGAAGCAGAAAAGCTTCTCGGCGATCAAGCCGT   1097

BSNT_05418___   1101 TTACAGCGAAGATCTGTATGAGACGATTCAAGATACGGATGCCTGCGTCA   1150
                     ||||||||||||||||||||||||||||||.|||||||||||.|||||||
BL03352___tua   1098 TTACAGCGAAGATCTGTATGAGACGATTCAGGATACGGATGCGTGCGTCA   1147

BSNT_05418___   1151 TATTGACAGAGTGGCATGAGATACAGAACATGGATATTACCAAACTCAAG   1200
                     |||||||.|||||||..||..|||||||||||||||||.|||||||.|||
BL03352___tua   1148 TATTGACGGAGTGGCCGGAAGTACAGAACATGGATATTGCCAAACTTAAG   1197

BSNT_05418___   1201 GCCGCTTTGAAAAATCCCGTCTTAATCGATGGACGTAATATATTTGAAGT   1250
                     .|.|||||||||||.||||||||||||||||||.|.||||||||||||.|
BL03352___tua   1198 TCTGCTTTGAAAAACCCCGTCTTAATCGATGGAAGAAATATATTTGAAAT   1247

BSNT_05418___   1251 TGAAAAAATGAGAAACGAAGGTATGATCTATCATTCAATCGGACGGCCGG   1300
                     ||||.||||||||||||||||.||||||||.|||||||||||||||||||
BL03352___tua   1248 TGAACAAATGAGAAACGAAGGCATGATCTACCATTCAATCGGACGGCCGG   1297

BSNT_05418___   1301 AAGTACAGGTAGAAGGAATTCTGACCAACGTATAA   1335
                     |||||||||.|||||||||.|||||||||||||||
BL03352___tua   1298 AAGTACAGGGAGAAGGAATCCTGACCAACGTATAA   1332


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