Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05390 and BL03364
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:31
# Commandline: needle
# -asequence dna-align/BSNT_05390___comFB.1.5803.seq
# -bsequence dna-align/BL03364___comFB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05390___comFB-BL03364___comFB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05390___comFB-BL03364___comFB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05390___comFB
# 2: BL03364___comFB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 320
# Identity: 196/320 (61.2%)
# Similarity: 196/320 (61.2%)
# Gaps: 58/320 (18.1%)
# Score: 537.5
#
#
#=======================================
BSNT_05390___ 1 ATGCTTGTCAATTCAAAAGAAATCGTAATGAAAGAACTGCTCGACCGATA 50
|||||.|||||..|.||||||...||..||.||||..||.|.||.|..||
BL03364___com 1 ATGCTAGTCAACGCCAAAGAAGCTGTTTTGGAAGAGTTGTTTGATCAGTA 50
BSNT_05390___ 51 TATGGACCAGCTTCATATGGCCTGTACTTGCCAAGTA--TGCCAAAACGA 98
|||.||.|||||.||.|||..||||||.||| ||.| |||....|.||
BL03364___com 51 TATCGATCAGCTGCACATGAGCTGTACGTGC--AGCAGGTGCAGGGAGGA 98
BSNT_05390___ 99 TGTATTGGCACTT-TCTTTAAACAAAGTG-AGTCCATCC----TACGTTA 142
|||..|.|| ||| .||||||| || |||..|.|| ||.||.|
BL03364___com 99 TGTGCTCGC-CTTGGCTTTAAA-----TGCAGTAAAACCGCAATATGTAA 142
BSNT_05390___ 143 CTGATTTTAAA----AAGATCGCATATACGAAAGCTGAGCTGGTAGATAA 188
|.||| .| |||.|.||.||.|..|||||.|||||.||.||.||
BL03364___com 143 CAGAT----CAGTCGAAGCTGGCTTACATAAAAGCAGAGCTCGTTGACAA 188
BSNT_05390___ 189 ACAAAAAAACACAGCAATGCTTGTCATTTTGGCTGAATCTGCTGCAGTAG 238
||||||.||.|||.||||||||||||..|||||||||.||||
BL03364___com 189 ACAAAAGAATACATCAATGCTTGTCACCTTGGCTGAAGCTGC-------- 230
BSNT_05390___ 239 TTTCAGAGAGTCCAA-------GCGATTT----ATGTCAAACGAAGCAGG 277
||||.||...|| .||.||| |.| |||.||||| ||
BL03364___com 231 ---CAGAAAGGTGAATGAAAACCCGCTTTGCGCAAG-CAATCGAAG-AG- 274
BSNT_05390___ 278 AGGAGGCATTCATAAACTGA 297
|||||.| ||||
BL03364___com 275 -GGAGGGA---ATAA----- 285
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