Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05388 and BL03366
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:31
# Commandline: needle
# -asequence dna-align/BSNT_05388___yvyF.1.5803.seq
# -bsequence dna-align/BL03366___yvyF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05388___yvyF-BL03366___yvyF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05388___yvyF-BL03366___yvyF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05388___yvyF
# 2: BL03366___yvyF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 448
# Identity: 299/448 (66.7%)
# Similarity: 299/448 (66.7%)
# Gaps: 56/448 (12.5%)
# Score: 914.5
#
#
#=======================================
BSNT_05388___ 1 ATGGGAGAACTGGCTAATTGTCCGAAATGCAATGCTTTATTTTTAAAAAC 50
|||.|..||.||||.||||||||.|.|||.||.||.||.|||.|.|
BL03366___yvy 1 ATGAGTCAATTGGCGAATTGTCCAAGATGTAACGCATTGTTTATGA---- 46
BSNT_05388___ 51 AAAGC----TGCAAACTGTATG----TCAGGCGTGTATTAAGGAAGAAGA 92
||||| |.|||||.||.|| |||.||.|| ||.||||||||
BL03366___yvy 47 AAAGCAGTTTTCAAACCGTTTGCGCTTCATGCTTG----AAAGAAGAAGA 92
BSNT_05388___ 93 AAAATCATTTGAGACTGTCTATAAATTTTTAAGAAAACAGGAAAACCGGC 142
.....|.|.|||.|.|||.|||||||||.|.|.|||||||||||||||||
BL03366___yvy 93 GCGCGCGTATGAAATTGTTTATAAATTTCTGAAAAAACAGGAAAACCGGC 142
BSNT_05388___ 143 AATCAAC----TTTGAG-CCGGATAACTGAGGAAACAGGTGTGGAAGAAG 187
|.||.|| |||.|| .||.| ||..||||||||||.|||||||
BL03366___yvy 143 AGTCCACGATGTTTCAGATCGTA-----GAAAAAACAGGTGTCGAAGAAG 187
BSNT_05388___ 188 AGCTGATATTGAAATTCATCAGGCAGAAGCGAATTCAGATCACTCATCTT 237
||.|.||||||||.||.||.||.|||||.||.|||||.|||.||.||.|.
BL03366___yvy 188 AGTTAATATTGAAGTTTATTAGACAGAAACGCATTCAAATCTCTAATTTC 237
BSNT_05388___ 238 CCTAAT-TTGGCATACCCTTGTGAAAAGTGCGGGACATCGATTAGAGAAG 286
||.||| |.||| ||.||.||.||||.||||||.||....|||.|.||||
BL03366___yvy 238 CCGAATCTCGGC-TATCCGTGCGAAAGGTGCGGCACGCTTATTCGGGAAG 286
BSNT_05388___ 287 GCAAGTTCTGCAAGGATTGCCAGTC---CGA----TATTAAGGAT--CAA 327
| |.||| |||||..||| ||| .|||..|.|| |||
BL03366___yvy 287 G-ACGTT--------ATTGCATGTCATGCGAGCAGGATTTGGCATCGCAA 327
BSNT_05388___ 328 ATGGATCATTTGAACCA---CGAGGATGCTCTGAAAATCGAGAAAGAA-- 372
|||..|||.||..|||| .|||.| ||| ||||| ||||.||||
BL03366___yvy 328 ATGAGTCAATTAGACCAGCTGGAGCA-GCT-TGAAA---GAGAGAGAAAT 372
BSNT_05388___ 373 AATAGTAAAAAAGACACATACTATGCCTATAATACCAAAAACAGCTGA 420
||||||...||||.|||.||||||.|||.|||..|||||||...||||
BL03366___yvy 373 AATAGTTCTAAAGGCACGTACTATACCTTTAAGCCCAAAAATGACTGA 420
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