Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05381 and BL03373
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:31
# Commandline: needle
# -asequence dna-align/BSNT_05381___csrA.1.5803.seq
# -bsequence dna-align/BL03373___csrA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05381___csrA-BL03373___csrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05381___csrA-BL03373___csrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05381___csrA
# 2: BL03373___csrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity: 171/225 (76.0%)
# Similarity: 171/225 (76.0%)
# Gaps: 0/225 ( 0.0%)
# Score: 639.0
#
#
#=======================================
BSNT_05381___ 1 ATGCTAGTTTTATCGCGGAAAATAAACGAAGCGATTCAAATAGGTGCTGA 50
||||||||.|||||.||.||..|.||.||||||||||||||.||.|..||
BL03373___csr 1 ATGCTAGTCTTATCCCGCAAGCTCAATGAAGCGATTCAAATCGGAGACGA 50
BSNT_05381___ 51 TATTGAAGTGAAAGTGATTGCGGTTGAGGGGGATCAAGTGAAGCTTGGAA 100
|||.|||||||||.|.||..|.|||||.||.|||||.|||||..|.||.|
BL03373___csr 51 TATCGAAGTGAAAATCATATCCGTTGACGGAGATCAGGTGAAAATCGGCA 100
BSNT_05381___ 101 TTGACGCCCCAAAGCATATTGATATTCATAGGAAAGAAATTTATTTGACC 150
|.|||||.||.||||||||.||.|||||..|.||.|||||.||||||.|.
BL03373___csr 101 TCGACGCGCCGAAGCATATCGAAATTCACCGCAAGGAAATCTATTTGGCG 150
BSNT_05381___ 151 ATTCAGGAAGAAAATAACCGTGCGGCAGCGTTATCCAGCGATGTGATCTC 200
||.|||||||||||.|.|||.||.||..|..|.||.|.||||.||.|..|
BL03373___csr 151 ATCCAGGAAGAAAACAGCCGGGCCGCTTCCATCTCAAACGATTTGCTTGC 200
BSNT_05381___ 201 CACATTATCCTCACAAAAAAAGTGA 225
.|.||||||||||||||||||||||
BL03373___csr 201 GAAATTATCCTCACAAAAAAAGTGA 225
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