Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05378 and BL03375

See Amino acid alignment / Visit BSNT_05378 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:30
# Commandline: needle
#    -asequence dna-align/BSNT_05378.1.5803.seq
#    -bsequence dna-align/BL03375___yvyC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05378-BL03375___yvyC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05378-BL03375___yvyC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05378
# 2: BL03375___yvyC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     142/345 (41.2%)
# Similarity:   142/345 (41.2%)
# Gaps:         156/345 (45.2%)
# Score: 488.5
# 
#
#=======================================

BSNT_05378         0 --------------------------------------------------      0
                                                                       
BL03375___yvy      1 TTGTCGATCAATAGATTGTCATCTTTAGAACCCATTATTGATGCTTACAA     50

BSNT_05378         0 --------------------------------------------------      0
                                                                       
BL03375___yvy     51 AACACAGATGTTGAATAAACAGTATGAAGCTGTGGAACGCCCGCAGCAGA    100

BSNT_05378         1 ----------------------------------------------ATG-      3
                                                                   |.| 
BL03375___yvy    101 CGGACGCTGCAGAATTTACATTTGCTCAGCTTGAAAAAACCATACAAGGC    150

BSNT_05378         4 ---AACAAGCTTTTGGAACCTTCGCAAGTTCATCTGAAGTTCGAGCTTCA     50
                        |||||.||||||||.||.|||||.||.||.||..||||.|.||||||
BL03375___yvy    151 GCAAACAACCTTTTGGAGCCGTCGCAGGTGCACCTACAGTTTGTGCTTCA    200

BSNT_05378        51 TGACAAGTTAAATGAATACTATGTAAAGGTAATAGAGGACTCT---ACAA     97
                     .||.||.||....||.||.|||||.||||   |.|.||||..|   |||.
BL03375___yvy    201 CGAAAAATTGGGAGAGTATTATGTGAAGG---TCGTGGACAATCGGACAG    247

BSNT_05378        98 ATGAAGTGATCCGCGAAATTCCACCAAAACGGTGGCTTGATTTTTATGCG    147
                     |.|||||..|||||||.|||||.|||||...||||||.||||||||||||
BL03375___yvy    248 AGGAAGTCGTCCGCGAGATTCCGCCAAAGGAGTGGCTCGATTTTTATGCG    297

BSNT_05378       148 GCTATGACTGAATTTCTTGGGTTATTTGTAGATGAAAAAAAGTAG    192
                     ||.|||.|.||||||.|.||||||.||||.|||.|||..|..|||
BL03375___yvy    298 GCGATGGCGGAATTTATGGGGTTAATTGTCGATAAAACTACATAG    342


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