Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05375 and BL03377

See Amino acid alignment / Visit BSNT_05375 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:30
# Commandline: needle
#    -asequence dna-align/BSNT_05375___fliS.1.5803.seq
#    -bsequence dna-align/BL03377___fliS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05375___fliS-BL03377___fliS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05375___fliS-BL03377___fliS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05375___fliS
# 2: BL03377___fliS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 408
# Identity:     296/408 (72.5%)
# Similarity:   296/408 (72.5%)
# Gaps:          12/408 ( 2.9%)
# Score: 1017.0
# 
#
#=======================================

BSNT_05375___      1 ATGGCGATCCAAAATCCATATACAGCCTATCAGCAAAATTCAGTGAATAC     50
                     |||||..|..|.|||||.|||.||||.|||||||||||||||.|.||.|.
BL03377___fli      1 ATGGCTTTAAACAATCCGTATGCAGCTTATCAGCAAAATTCAATCAACAT     50

BSNT_05375___     51 GGCTACACCCGGGGAGCTGACGCTTATGCTGTATAATGGCTGTTTAAAAT    100
                     |||.||.||.||.||..|||||||||||||.|.|.|.|||||..|.||||
BL03377___fli     51 GGCGACTCCTGGAGAATTGACGCTTATGCTATTTGACGGCTGCCTTAAAT    100

BSNT_05375___    101 TTAT-AAGACTTGCCTCTCAGGCCATTGAGAATGATGATATGG-AACGTA    148
                     |||| ||| ||.||....|||||.|||||..|.||.||||||| |||| |
BL03377___fli    101 TTATGAAG-CTGGCGAAACAGGCGATTGAACAAGAGGATATGGAAACG-A    148

BSNT_05375___    149 AAAATGAGAATCTGATTAAAGCGCAAAATATTATTCAGGAATTAAATTTT    198
                     |||||..|||.||..|.|||||.|||||.|||||.|||||..|.|||.|.
BL03377___fli    149 AAAATACGAACCTTGTCAAAGCTCAAAACATTATACAGGAGCTCAATATC    198

BSNT_05375___    199 ACACTTAACCGTAACATAGAGCTTTCCGCTTCCATGGGTGCGATGTACGA    248
                     ||.|||.|.||.||..|.||..|..|||||||.|||||.|||||||||||
BL03377___fli    199 ACCCTTGATCGGAAAGTCGAATTGGCCGCTTCGATGGGGGCGATGTACGA    248

BSNT_05375___    249 TTATATGTATCG----AAGATTGGTACAGGCAAATATCAAAAATGATACG    294
                     .|||||..|.||    ..|||||    |.|||||.||.||.|||||.|..
BL03377___fli    249 GTATATCCACCGCCGCCTGATTG----AAGCAAACATTAACAATGACAAA    294

BSNT_05375___    295 GGCATGCTGGCTGAGGTTGAAGGCTATGTAACAGATTTTCGCGATGCTTG    344
                     |..||..||||.||.||.|||||.|||||.|.||||||.||||||||.||
BL03377___fli    295 GATATCGTGGCGGAAGTCGAAGGGTATGTCAAAGATTTACGCGATGCCTG    344

BSNT_05375___    345 GAAACAGGCCATTCAAAGTGAACGGAAGGACCGGCACGGATCAGGCGGGA    394
                     |||.|||||..||||||.|||||||.|||.||||..||||||.|||||..
BL03377___fli    345 GAAGCAGGCGCTTCAAATTGAACGGCAGGGCCGGTTCGGATCGGGCGGAC    394

BSNT_05375___    395 TCGCATGA    402
                     |.||||.|
BL03377___fli    395 TGGCATAA    402


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