Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05365 and BL03386
See
Amino acid alignment /
Visit
BSNT_05365 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:29
# Commandline: needle
# -asequence dna-align/BSNT_05365___ftsE.1.5803.seq
# -bsequence dna-align/BL03386___ftsE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05365___ftsE-BL03386___ftsE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05365___ftsE-BL03386___ftsE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05365___ftsE
# 2: BL03386___ftsE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 698
# Identity: 538/698 (77.1%)
# Similarity: 538/698 (77.1%)
# Gaps: 22/698 ( 3.2%)
# Score: 2051.0
#
#
#=======================================
BSNT_05365___ 1 ATGATAGAGATGAAGGAAGTATATAAAGCCTATCCGAACGGCGTAAAAGC 50
|||||.||.||.||.||.||||||||..|.|||.|.|||||.||....||
BL03386___fts 1 ATGATCGAAATAAAAGATGTATATAAGACTTATTCCAACGGGGTCTCGGC 50
BSNT_05365___ 51 GCTCAATGGGAT----TTCTGTTACCATTCATCCCGGTGAGTTTGTGTAT 96
|||.||.||.|| .||| |.||..|||||||.||.|||||.|||
BL03386___fts 51 GCTGAACGGAATAAGCATCT----CTATATATCCCGGGGAATTTGTTTAT 96
BSNT_05365___ 97 GTTGTTGGTCCGAGCGGAGCGGGTAAATCTACTTTTATAAAAATGATTTA 146
|||||.||.|||||||||||.||.|||||.||.||.||.|||||||||||
BL03386___fts 97 GTTGTAGGACCGAGCGGAGCAGGAAAATCAACCTTCATTAAAATGATTTA 146
BSNT_05365___ 147 CAGAGAAGAAAAACCGACAAAAGGACAAATTTTAATCAATCATAAAGATC 196
|.|.||||||||.||..|.|||||..|.|||.|.||.||..|||||.||.
BL03386___fts 147 CCGCGAAGAAAAGCCTTCCAAAGGGAAGATTGTCATAAACAATAAAAATT 196
BSNT_05365___ 197 TCGCGACA-ATTAAAGAAAAAGAGATTCCTTTCGTGCGCCGCAAAATAGG 245
|.||| || .|.||||||||||||||||||||..|..|..|.|||||.||
BL03386___fts 197 TGGCG-CAGCTCAAAGAAAAAGAGATTCCTTTTATCAGAAGGAAAATCGG 245
BSNT_05365___ 246 CGTTGTCTTTCAGGATTTCAAGCTTCTTCCGAAACTAACTGTTTTTGAAA 295
||||||.||.||.||.||.||.||.||.|||||.||.||.||.|||||||
BL03386___fts 246 CGTTGTATTCCAAGACTTTAAACTGCTGCCGAAGCTGACGGTGTTTGAAA 295
BSNT_05365___ 296 ATGTGGCATTTGCCCTTGAAGTGATTGGAGAACAGCCGTCTG------TC 339
||||.||||||||..|.||.||.||.||.||.| ||| |.| ||
BL03386___fts 296 ATGTTGCATTTGCTTTAGAGGTCATCGGGGAGC-GCC--CAGAGGTGATC 342
BSNT_05365___ 340 ATTAAGAAACGGGTGCTTGAAGTGCTTGATCTCGTGCAGCTGAAGCATAA 389
|..||.||| ||||||||||||||||||||.||.|||||||||||.||
BL03386___fts 343 AGAAAAAAA---GTGCTTGAAGTGCTTGATCTTGTCCAGCTGAAGCACAA 389
BSNT_05365___ 390 AGCGCGACAATTTCCTGACCAGCTTTCAGGCGGGGAGCAGCAGCGTGTAT 439
|||..|.|||||||||||.|||||.||.||.||.||.|||||.||.||.|
BL03386___fts 390 AGCAAGGCAATTTCCTGATCAGCTGTCCGGAGGAGAACAGCAACGGGTTT 439
BSNT_05365___ 440 CTATTGCCAGATCAATTGTGAACAACCCTGATGTTGTCATTGCTGATGAA 489
|.|||||..|.|||||.||.|||.||||||||||.||.||.|||||.||.
BL03386___fts 440 CAATTGCGCGGTCAATCGTCAACGACCCTGATGTCGTGATCGCTGACGAG 489
BSNT_05365___ 490 CCGACAGGAAACCTTGATCCGGATACGTCCTGGGAAGTCATGAAGACGCT 539
|||||.|||||||||||.||.||.|||||.||||||.|||||||||||||
BL03386___fts 490 CCGACGGGAAACCTTGACCCTGAGACGTCTTGGGAAATCATGAAGACGCT 539
BSNT_05365___ 540 GGAGGAAGTTAATAACCGCGGGACAACAGTCGTGATGGCGACACATAATA 589
.||.||..|.||.||||||||.|||||||||||.||||||||.|||||.|
BL03386___fts 540 CGAAGAGATCAACAACCGCGGAACAACAGTCGTTATGGCGACTCATAACA 589
BSNT_05365___ 590 AAGAAATCGTAAACACCATGAAGAAACGTGTCATTGCAATCGAAGATGGT 639
||||||||||||||||||||||||||||.|||||.|||||||||||.||.
BL03386___fts 590 AAGAAATCGTAAACACCATGAAGAAACGGGTCATCGCAATCGAAGACGGG 639
BSNT_05365___ 640 ATCATTGTGCGTGATGAGTCAAGAGGGGAGTATGGTTCATATGATTAA 687
.||||||||||||||||..|.|||||||||||||||||.||||||||.
BL03386___fts 640 GTCATTGTGCGTGATGAAGCTAGAGGGGAGTATGGTTCTTATGATTAG 687
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.