Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05339 and BL03399
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:27
# Commandline: needle
# -asequence dna-align/BSNT_05339___yvlD.1.5803.seq
# -bsequence dna-align/BL03399___yvlD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05339___yvlD-BL03399___yvlD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05339___yvlD-BL03399___yvlD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05339___yvlD
# 2: BL03399___yvlD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 367
# Identity: 258/367 (70.3%)
# Similarity: 258/367 (70.3%)
# Gaps: 14/367 ( 3.8%)
# Score: 857.0
#
#
#=======================================
BSNT_05339___ 1 ATGGTAAAATGGGCAGTCAGCATTTTAGTCAATGCATTGTTATTAATCGT 50
|||.|.|.||||....|.|.|.||.|.||||||||.||.||||||||.||
BL03399___yvl 1 ATGATGAGATGGATTATAAACGTTCTTGTCAATGCCTTATTATTAATTGT 50
BSNT_05339___ 51 CATTGATGGATATATTGACTCCATCCATATCAGCAGCATTGGGGCAGCGA 100
|||||..||.||..||||..|..|.||..||||.|||||.||.|||||.|
BL03399___yvl 51 CATTGCCGGTTACTTTGATGCGGTTCACGTCAGAAGCATCGGAGCAGCCA 100
BSNT_05339___ 101 TTATCGCCAGCCTCATTTTATCGATCTTAAACGTGCTGATTAAACC---G 147
|||..||.|||.|.||||||||.||||||||..||.|..|.||.|| |
BL03399___yvl 101 TTACGGCAAGCTTGATTTTATCCATCTTAAATATGTTTGTGAAGCCCGTG 150
BSNT_05339___ 148 CTTTTAATTATCTTTACACTGCCGGTCACCATGGTGACGCTTGGACTCTT 197
||..|.||| ||.||.|||||.|||||..|..|.|||||.||..|.||
BL03399___yvl 151 CTGGTGATT---TTGACGCTGCCCGTCACAGTAATTACGCTAGGTTTATT 197
BSNT_05339___ 198 CTTGTTTGTGATTAACGCCATCACGC-TTATGATGACCGCGTCCATTATG 246
.||||||.|.||.||.||.|||||.| |||| ||||||||||||||||||
BL03399___yvl 198 TTTGTTTATCATCAATGCGATCACTCTTTAT-ATGACCGCGTCCATTATG 246
BSNT_05339___ 247 GGTGACAGCTTTCAAATCGACGGCTTCGGCACAGCGATATGGGCATCCGT 296
||.|||||.|||.|..|.||||||||.||.|||||.||.|..||.||..|
BL03399___yvl 247 GGGGACAGTTTTGACCTGGACGGCTTTGGGACAGCCATTTTTGCGTCGAT 296
BSNT_05339___ 297 TATCCTGTCGGTCTTCCATTTGCTGATTCAAAAAGGCATTTTAGAGCCGC 346
..||||||||||.||.||.|||||.||||||||||..|||.|.||.|||.
BL03399___yvl 297 CGTCCTGTCGGTTTTTCACTTGCTCATTCAAAAAGCAATTATCGAACCGA 346
BSNT_05339___ 347 T---TAGAAAAAAATAA 360
| .||||||.||
BL03399___yvl 347 TGTCCAGAAAATAA--- 360
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