Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05185 and BL03444

See Amino acid alignment / Visit BSNT_05185 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:18
# Commandline: needle
#    -asequence dna-align/BSNT_05185___yveQ.1.5803.seq
#    -bsequence dna-align/BL03444___yveQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05185___yveQ-BL03444___yveQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05185___yveQ-BL03444___yveQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05185___yveQ
# 2: BL03444___yveQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1167
# Identity:     789/1167 (67.6%)
# Similarity:   789/1167 (67.6%)
# Gaps:         126/1167 (10.8%)
# Score: 2541.5
# 
#
#=======================================

BSNT_05185___      1 ATGATTGTATATGCC--GTT-AATATGGGGATTGTATTTATTTGGTCTTG     47
                     |||..|||.||   |  ||| ||||||||||||||.||..|.|||||.||
BL03444___yve      1 ATGGCTGTCTA---CATGTTGAATATGGGGATTGTTTTCGTCTGGTCATG     47

BSNT_05185___     48 GTTCGCTAAAATGTGCGGC-GGCCGTGACGATTC----GCTTGCC-ACGG     91
                     |||.||.|||||||.|||| ||    ||.|| ||    || |||| ||||
BL03444___yve     48 GTTTGCGAAAATGTACGGCAGG----GAAGA-TCACAGGC-TGCCGACGG     91

BSNT_05185___     92 GGTATCGGCCGAATAAGCTTTTGATC-------TGGATTCCGCTCGCTTC    134
                     |.||.||.||||||  ||    ||||       |.| ||||||||||.||
BL03444___yve     92 GCTACCGTCCGAAT--GC----GATCCTCACCGTCG-TTCCGCTCGCGTC    134

BSNT_05185___    135 ACTTG-TGCTCGTGTCAGGTCTCCGCTATCGA-GTCGGCACGGATTTTCA    182
                      .||| |..||||..|.||..|..|.|| |.| |||||.|||||||..||
BL03444___yve    135 -TTTGATTATCGTTGCCGGCTTAAGATA-CAAGGTCGGAACGGATTACCA    182

BSNT_05185___    183 GACGTACACGCTGCTGTACGAATTGGCGGGCGATTATCAAAAT-------    225
                     .||.||.|.||||||.||||||||.||.||        |||||       
BL03444___yve    183 CACATATATGCTGCTTTACGAATTAGCCGG--------AAAATACAACAG    224

BSNT_05185___    226 -GTGTGGCAGATATTCGGTTTCGGCACAGCGAAAACAGCGACAGATCCGG    274
                      .|.|||.||||||||||||||||.||||..||..|..||||.||.||||
BL03444___yve    225 CATTTGGGAGATATTCGGTTTCGGAACAGGCAAGTCGTCGACGGACCCGG    274

BSNT_05185___    275 GGTTTACCGCATTCCTTTGGCTGATGA-----ATTTCATCACGGAAGATC    319
                     |.|||||||||.||.|.|||.|..|.|     ||||||     |..||||
BL03444___yve    275 GATTTACCGCACTCTTATGGATTTTAAATCAGATTTCA-----GCCGATC    319

BSNT_05185___    320 CTCAAATCATGTATTTTACGGTGGCGGTCG---TGACCTACAGCTTTATT    366
                     |.....|||||   |||.|.||.|..|.||   |.|||||.|.||.||||
BL03444___yve    320 CGGCGCTCATG---TTTGCCGTCGTTGCCGCGATTACCTATATCTATATT    366

BSNT_05185___    367 ATGAAGACACTCGCCGACTATGGCAGGCCGTTTGAGCTGAGTGTCTTTTT    416
                     .|.|||||.||....|..|||||.|||||||||||..||||..|.|||.|
BL03444___yve    367 GTCAAGACGCTTTATGTGTATGGAAGGCCGTTTGAATTGAGCATGTTTCT    416

BSNT_05185___    417 GTTTTTGGGAACCTTTCATTACTACGCGTCTTTTAACGGCATCAGGCAAT    466
                     ||||.|.||.|..|||||.||.||.||.||.|||||||||||..|.||||
BL03444___yve    417 GTTTATCGGCATGTTTCACTATTATGCTTCGTTTAACGGCATTCGCCAAT    466

BSNT_05185___    467 ACATGGTGGCAGCTGTTTTGTTTTGGGCGGTCCGTTATATCATCAGCGGG    516
                     ||||||.|||.||..||.|||||||||||||.||.|||.|.|||...|||
BL03444___yve    467 ACATGGCGGCGGCCATTCTGTTTTGGGCGGTGCGGTATCTGATCGATGGG    516

BSNT_05185___    517 AA-CTGGAAGCGATATTTCCTGATTGTGCTGGTCAGCTCGCTCTTTCATT    565
                     || |||| .|||.|||.|..|..||||.|||.||.|.|||||.|||||||
BL03444___yve    517 AAGCTGG-TGCGCTATATGATCGTTGTACTGATCTGTTCGCTTTTTCATT    565

BSNT_05185___    566 CGTCGGCGCTGATTATGATTCCGGTGTACTTTATTGTCAGAAGAAAAGCC    615
                     |.|||||..||||.|||||||||||.||.||.||.||||||||||||||.
BL03444___yve    566 CTTCGGCATTGATCATGATTCCGGTTTATTTCATCGTCAGAAGAAAAGCG    615

BSNT_05185___    616 TGGTCTCCGGCGATATTCGGCCTATCCGCT-----TTGTTTCTCGGCAT-    659
                     |||||              ||||.|||.||     .||.|.||||.|.| 
BL03444___yve    616 TGGTC--------------GCCTGTCCTCTGGTGCCTGATGCTCGTCTTT    651

BSNT_05185___    660 --------GACATTTTTATATCAAAAATTTATTTCTGTGTTTGTCGTTGT    701
                             |||.|||.|.||||||||||||.|.||.||.||..|.||.||
BL03444___yve    652 TTGGCGGGGACTTTTCTGTATCAAAAATTTCTGTCCGTATTCCTAGTCGT    701

BSNT_05185___    702 ACTTGAAAACAGCTC-ATACAGCCATTATGAAAAATGGCTCATGACGAAC    750
                     .||||||||||| || ||||.|.|||||||||.|||||||.||||.|||.
BL03444___yve    702 GCTTGAAAACAG-TCAATACGGACATTATGAAGAATGGCTGATGAAGAAT    750

BSNT_05185___    751 ACAAATGGAATGAATGTGATCAAAATCGCTGTGTTGGTTCTGCCGCTGTT    800
                     |||||.||.|||||.||.||.||||||...||..|..||||.|||||...
BL03444___yve    751 ACAAACGGCATGAACGTTATTAAAATCATCGTTCTTCTTCTCCCGCTCGC    800

BSNT_05185___    801 CCTTGCATTTTGCTATAAAGAACGACTGCGGAGTCTGTGGCCGCAAATTG    850
                     .|||||.|||||||..|..||.|..||..|.|..|..|||||..||.|.|
BL03444___yve    801 ACTTGCCTTTTGCTTCAGGGAGCAGCTCAGAAAGCGCTGGCCCGAAGTCG    850

BSNT_05185___    851 ATATTGTCGTCAA--TTTGTGCCTGCTAGGTTTTTTGTTCGGCCTTTTGG    898
                     ||..|.||||.||  |||||  |||.|.|||||..|||||||..||||||
BL03444___yve    851 ATTATATCGTAAACCTTTGT--CTGATCGGTTTCCTGTTCGGAATTTTGG    898

BSNT_05185___    899 CCACAAAGGACGTGATTTTTGCCAGATTCAATATTTATTTCGGTCTGTAT    948
                     |.||||||||.||.||||||||.||.|||||.|||||||||||.||.|||
BL03444___yve    899 CGACAAAGGATGTCATTTTTGCGAGGTTCAACATTTATTTCGGGCTCTAT    948

BSNT_05185___    949 CAAATGATCCTAGTCCCTTATTTCGTCAGGATATTTGATGAAAAATCGAA    998
                     ||..||||.||.||.||||||||.||..||||.|||||....|||||.||
BL03444___yve    949 CAGCTGATTCTCGTTCCTTATTTTGTACGGATTTTTGAACCGAAATCAAA    998

BSNT_05185___    999 CGCTCTTATCTATATCGCTATCGTTGTTTGTTATT----------TTCTT   1038
                     |||.|||.|.|||.|           ||||.|.||          |||||
BL03444___yve    999 CGCGCTTCTTTATGT-----------TTTGATTTTGATCTGTTACTTCTT   1037

BSNT_05185___   1039 -TACAGTTATTTGCTTATGCCGGTCGATTCATCGGTTCTGCCTTACAGAA   1087
                      |||||.|.|.||||.||||||.||||.||.|||||..||||.|||||||
BL03444___yve   1038 ATACAGCTTTATGCTCATGCCGTTCGACTCGTCGGTATTGCCGTACAGAA   1087

BSNT_05185___   1088 CGATTTTTTCCCGGTAA   1104
                     ||||||||...||.|.|
BL03444___yve   1088 CGATTTTTGAACGTTGA   1104


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