Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05149 and BL03456

See Amino acid alignment / Visit BSNT_05149 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:16
# Commandline: needle
#    -asequence dna-align/BSNT_05149___yvfV.1.5803.seq
#    -bsequence dna-align/BL03456___yvfV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05149___yvfV-BL03456___yvfV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05149___yvfV-BL03456___yvfV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05149___yvfV
# 2: BL03456___yvfV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 726
# Identity:     566/726 (78.0%)
# Similarity:   566/726 (78.0%)
# Gaps:          18/726 ( 2.5%)
# Score: 2177.0
# 
#
#=======================================

BSNT_05149___      1 ATGAAAGTCTCACTTTTTGTCACTTGTCTTGTTGATATGTTTCAAACAAA     50
                     ||||||||.|||||.|||.||||.|||.|.|||||.||||||||..||||
BL03456___yvf      1 ATGAAAGTATCACTGTTTATCACGTGTTTGGTTGACATGTTTCAGTCAAA     50

BSNT_05149___     51 TGTCGGAAAAGCAACGGTTGAGCTGCTGGAGCGGCTTGGGTGCGAGGTTG    100
                     ||||||||||||.||.|||||.||||||||||||||.||.||.||.||.|
BL03456___yvf     51 TGTCGGAAAAGCGACTGTTGAACTGCTGGAGCGGCTCGGATGTGAAGTGG    100

BSNT_05149___    101 ATTTTCCAGAAGGGCAGATTTGCTGCGGACAGCCGGCTTACAACAGCGGC    150
                     |||||||.|||||||||||.||||||||.|||||.||.||||||||||||
BL03456___yvf    101 ATTTTCCCGAAGGGCAGATCTGCTGCGGCCAGCCTGCGTACAACAGCGGC    150

BSNT_05149___    151 TATGTACATGACGCCAAAAAAGCAATGAAACGGATGATCGAAACGTT---    197
                     |||||..|.||..||||||||||.||||.|||||||||.||.|||||   
BL03456___yvf    151 TATGTCAAAGATTCCAAAAAAGCGATGAGACGGATGATTGAGACGTTTGA    200

BSNT_05149___    198 -TCAGGATTCCGAATATGTTGTCAGTCCTTCGGGTTCCTGCACAACGATG    246
                      ||||    |.|||||.||.|||||.|||||.||.||.|||.|....|||
BL03456___yvf    201 ATCAG----CTGAATACGTCGTCAGCCCTTCAGGATCGTGCGCTTTTATG    246

BSNT_05149___    247 TTCCGGGAGTATCCGCACCTGTTTCAGGATGATCCGAAATGGGCCGATAA    296
                     |||...|||||.||||||||.||.|.||||||.|||...|||||.||.||
BL03456___yvf    247 TTCAAAGAGTACCCGCACCTTTTCCGGGATGAACCGGCCTGGGCGGAAAA    296

BSNT_05149___    297 AGCGCAAAAGCTGGCGGATAAAACGTATGAACTGACAGATTTTATTGTGA    346
                     ||||||...||||||.||.|||||||||||.|||||.||||||||.||.|
BL03456___yvf    297 AGCGCAGCGGCTGGCTGACAAAACGTATGAGCTGACCGATTTTATCGTCA    346

BSNT_05149___    347 ACGTCCTTG-GGGTAGAGGATGTCGGCGCGACCCTTCATACAAAAGCGAC    395
                     |||| .||| .|.|.|||||.|||||.|||||.||..|.|.|||.|||| 
BL03456___yvf    347 ACGT-ATTGAAGATTGAGGACGTCGGGGCGACACTCGAGAAAAAGGCGA-    394

BSNT_05149___    396 CTTA-CATACGTCGTGCCATATGACTAGGCTGCTGGGTGTTCGGGAGGAG    444
                     |||| ||||||||.|||||||||||.|||||..||||.||...|||.|.|
BL03456___yvf    395 CTTATCATACGTCATGCCATATGACAAGGCTTTTGGGAGTCACGGACGCG    444

BSNT_05149___    445 CCGATGAAGCTGTTGAGCCATGTGAAGGGCCTGCAGTTTACAGAGCTTCC    494
                     ||||||||||||.|..|.|||||||||||.|||.||||.||...|||.||
BL03456___yvf    445 CCGATGAAGCTGCTTCGGCATGTGAAGGGACTGGAGTTCACGCCGCTGCC    494

BSNT_05149___    495 GGGCAAACATAACTGCTGCGGATTCGGAGGAACGTTCTCCGTCAAGATGG    544
                     |.|||||||..||||||||||||||||.||.||.|||||.||.||||||.
BL03456___yvf    495 GCGCAAACACGACTGCTGCGGATTCGGGGGCACTTTCTCGGTGAAGATGT    544

BSNT_05149___    545 CGCAGATTTCTGAGCAGATGGTCGATGAAAAAGTCGAATGTGTGGAGGAA    594
                     ||||.||.||.||.||||||||||||||.|||||.|..|||||.||.|||
BL03456___yvf    545 CGCAAATATCCGAACAGATGGTCGATGAGAAAGTGGCGTGTGTCGAAGAA    594

BSNT_05149___    595 ACGGGAGCAGAGGTGCTGATCGGTGCTGACTGCGGCTGTTTGATGAATAT    644
                     ||.|..||.||.|||.|.|||||.||.|||||||||||.|||||||||||
BL03456___yvf    595 ACAGCCGCCGACGTGTTAATCGGGGCGGACTGCGGCTGCTTGATGAATAT    644

BSNT_05149___    645 CGGGGGACGGCTTGACCGAAAAGATAA---GAATGTCAAAGTGATGCACA    691
                     |||.||.|||.|.|...||||..|.||   ||.||   ||||.|||||.|
BL03456___yvf    645 CGGCGGGCGGATCGGGAGAAAGAACAAGCCGATTG---AAGTCATGCATA    691

BSNT_05149___    692 TCGCCGAAGTGCTCAACAGCAGATAA    717
                     ||||.||||||||.||||||||||||
BL03456___yvf    692 TCGCAGAAGTGCTGAACAGCAGATAA    717


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