Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05148 and BL03457
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:16
# Commandline: needle
# -asequence dna-align/BSNT_05148___yvfW.1.5803.seq
# -bsequence dna-align/BL03457___yvfW.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05148___yvfW-BL03457___yvfW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05148___yvfW-BL03457___yvfW.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05148___yvfW
# 2: BL03457___yvfW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1459
# Identity: 1121/1459 (76.8%)
# Similarity: 1121/1459 (76.8%)
# Gaps: 44/1459 ( 3.0%)
# Score: 4255.0
#
#
#=======================================
BSNT_05148___ 1 ATGGCGATGAAAATCGGTACTGACGC----TTTTAAAGAGCGGGTATCAC 46
|||||.|||||.||||| .|||| .|||||||||||.||.|||.
BL03457___yvf 1 ATGGCAATGAAGATCGG----AACGCAGAAATTTAAAGAGCGCGTGTCAG 46
BSNT_05148___ 47 AGGGGATTGATAATGAATTTATGAGAGGTGCTGTTTCGGGTGCACAGGAG 96
|.|||.|.||.||.||.||||||||.||.||.|||||..|.||.||||||
BL03457___yvf 47 ACGGGCTCGACAACGAGTTTATGAGGGGGGCCGTTTCAAGCGCGCAGGAG 96
BSNT_05148___ 97 CGTCTGCGGACGCGGCGCCTAGAGGCAGCAGAAGAACTGGGAAACTGGGA 146
||..||.|..||||.||.||.|||||.|||.||||.||.||.||||||||
BL03457___yvf 97 CGCTTGAGAGCGCGCCGTCTTGAGGCGGCAAAAGAGCTCGGGAACTGGGA 146
BSNT_05148___ 147 GGAGTGGCGCTCATTATCAGAGGAAATCAGGCAGCATGTCCTTGAAAACC 196
.||.|||||.||..|..|.||.||||||||||||||.||.||.|||||.|
BL03457___yvf 147 AGAATGGCGGTCTCTGGCCGAAGAAATCAGGCAGCACGTGCTGGAAAATC 196
BSNT_05148___ 197 TTGATTTCTATCTCGGACAGCTTGCCGAAAATGTGGCGAAAAGAGGCGGA 246
|.||||.||||||.|.||||||||||||||||||.||.||||.||||||.
BL03457___yvf 197 TGGATTACTATCTAGAACAGCTTGCCGAAAATGTCGCCAAAAAAGGCGGG 246
BSNT_05148___ 247 CATGTCTATTTCGCGGAAACAGCGGAAGAGGCGTCTTCCTATATTCGGGA 296
||.||.|..||.|||.|.||.||.|||||.|||.|...|||.||.||.||
BL03457___yvf 247 CACGTTTTCTTTGCGCAGACGGCTGAAGAAGCGACAGGCTACATCCGCGA 296
BSNT_05148___ 297 TGTCATTCAAAAGAAGAACGGGAAGAAAATTGTGAAATCTAAATCAATGG 346
||||.|..|||||||.|||||.||.|||||.||.|||||.||||||||||
BL03457___yvf 297 TGTCGTGAAAAAGAAAAACGGCAAAAAAATCGTCAAATCAAAATCAATGG 346
BSNT_05148___ 347 TCACAGAGGAAATCAATCTGAATGAGGTGCTGGAGAAG-GAAGGCTGTGA 395
|.||.||.||||||||..||||.||||..||.|| ||| ||.|||||.||
BL03457___yvf 347 TGACCGAAGAAATCAACATGAACGAGGCACTTGA-AAGCGACGGCTGCGA 395
BSNT_05148___ 396 AGTCGTAGAAACCGATCTCGGCGAGTATATTTTGCAGATTGATGATCACG 445
|||.||.|||||||||.|.|||||.||.||..|.||.||.||||||||.|
BL03457___yvf 396 AGTGGTCGAAACCGATTTGGGCGAATACATCCTCCAAATCGATGATCATG 445
BSNT_05148___ 446 ATCCGCCGTCACATATCGTAGCGCCCGCCCTTCATAAAAATAAAGAGCAG 495
|||||||||||||||||||.||.||.||..|.||||||||.||||||||.
BL03457___yvf 446 ATCCGCCGTCACATATCGTCGCACCTGCTTTGCATAAAAACAAAGAGCAA 495
BSNT_05148___ 496 ATACGCGATGTGTTTAAAGAAAGACTGGACTA--TCAACATACAGAAAAA 543
||.|||||.||.||.|||||..|..|.|.||| .|||| ||.|||||.
BL03457___yvf 496 ATCCGCGACGTCTTCAAAGAGCGGATCGGCTACCGCAAC--ACCGAAAAG 543
BSNT_05148___ 544 CCGGAAGAGCTGGTGATGCATGCGCGCGCCATTCTCCGGAAAAAGTTTCT 593
|||||||||||.||.|||||.|||||||||.|.||..|.||.||.|||||
BL03457___yvf 544 CCGGAAGAGCTTGTCATGCACGCGCGCGCCGTGCTTAGAAAGAAATTTCT 593
BSNT_05148___ 594 GGAAGCGGATATCGGCATTACCGGCTGTAACTTCGCCATCGCTGACACGG 643
.|||||.||||||||||||||.|||||.||.||.||.||.||.||.||||
BL03457___yvf 594 CGAAGCTGATATCGGCATTACGGGCTGCAATTTTGCAATTGCCGATACGG 643
BSNT_05148___ 644 GTTCCGTCAGCCTTGTGACCAATGAAGGAAATGGACGGCTTGTGAGCACC 693
|.||.|||||||||||.||.||.||.|||||.|||||.||.||.|..||.
BL03457___yvf 644 GATCTGTCAGCCTTGTCACAAACGAGGGAAACGGACGTCTCGTCACGACT 693
BSNT_05148___ 694 TTGCCGAAAACACAAATTACCGTCATGGGAATGGAGCGGATTGTCCCGTC 743
.|.|||||.||.||.||||||||.|||||.|||||||||||.|||||.||
BL03457___yvf 694 ATTCCGAAGACGCAGATTACCGTGATGGGGATGGAGCGGATCGTCCCATC 743
BSNT_05148___ 744 ATTTTCTGAATTTGAAGTGCTAGTCAGCATGCTGACAAGAAGTGCTGTCG 793
|||....||.||||||||.||.|||.|||||||.||||||||.||.||||
BL03457___yvf 744 ATTCGACGAGTTTGAAGTTCTCGTCGGCATGCTCACAAGAAGCGCGGTCG 793
BSNT_05148___ 794 GACAGCGGCTGACAAGTTATATTACAGCTTTGACGGGTCCGAAGCTGGAA 843
|||||||||||||.||.|||||.||.||..||||.||.||||.||||...
BL03457___yvf 794 GACAGCGGCTGACGAGCTATATCACGGCGCTGACAGGGCCGAGGCTGCCC 843
BSNT_05148___ 844 GGTGAAGTGGACGGTCCGGAAGAATTCCATCTTGTCATCGTTGACAATGG 893
|||||||.||||||.|||||.||.||.||.||.||||||||||||||.||
BL03457___yvf 844 GGTGAAGCGGACGGCCCGGAGGAGTTTCACCTCGTCATCGTTGACAACGG 893
BSNT_05148___ 894 ACGATCCAATATCCTTGGAACGGAATTCCAGTCTGTGCTGCAATGTATCC 943
.||.|||||.||.||.||||||||.||.|||||.||.||.|||||.||||
BL03457___yvf 894 GCGTTCCAACATTCTCGGAACGGAGTTTCAGTCCGTCCTTCAATGCATCC 943
BSNT_05148___ 944 GCTGTGCCGCCTGTATCAATGTCTGTCCTGTGTACCGCCATGTCGGCGGA 993
|||||||.|||||.|||||||||||.||.||.|||||.|||||||||||.
BL03457___yvf 944 GCTGTGCGGCCTGCATCAATGTCTGCCCCGTTTACCGTCATGTCGGCGGG 993
BSNT_05148___ 994 CATTCATACGGCTCAATCTACTCGGGGCCTATCGGAGCGGTTTTATCACC 1043
|||||.|||||.||.|||||.||.||.||.|||||.||.||.||.||.||
BL03457___yvf 994 CATTCTTACGGTTCGATCTATTCAGGTCCGATCGGGGCTGTATTGTCGCC 1043
BSNT_05148___ 1044 GTTGCTCGGCGGTTATGACGATTATAAGGAGCTGCCGTACGCGTCTTCAC 1093
|.||||||||||.||||||||||||||.||.|||||||||||.|||||..
BL03457___yvf 1044 GCTGCTCGGCGGATATGACGATTATAAAGAACTGCCGTACGCATCTTCGT 1093
BSNT_05148___ 1094 TGTGCGCTGCTTGTTCAGAAGCCTGCCCGGTCAAAATCCCGCTTCATGAG 1143
|.||.||.|||||.||.|||||.||.|||||.||||||||||||||||||
BL03457___yvf 1094 TATGTGCGGCTTGCTCTGAAGCATGTCCGGTGAAAATCCCGCTTCATGAG 1143
BSNT_05148___ 1144 CTGCTACTCAAGCATCGTCAGAATATCGTCGAAAAAGAAGGCAGGGCGCC 1193
|||||.||.|||||..|.|||...|||||.|||||||||||..|.|||||
BL03457___yvf 1144 CTGCTTCTAAAGCACAGGCAGCGCATCGTTGAAAAAGAAGGGCGCGCGCC 1193
BSNT_05148___ 1194 GATCAGTGAAAAGCTTGCAATGAAAGCATTCGGACTTGGCGCATCCTCCT 1243
|||....||||||||.||.||||||||.||||| ||||| |.| ||.||
BL03457___yvf 1194 GATATCCGAAAAGCTGGCGATGAAAGCGTTCGG-CTTGG-GAA--CTTCT 1239
BSNT_05148___ 1244 ----TATCGCTTTACAAAATGGGCTCAAAATGGGCGCCGGCCGCCATGAC 1289
.|||.|||||||||||||||||.||||||||||||||.|||||||.
BL03457___yvf 1240 GCGCCATCCCTTTACAAAATGGGCTCCAAATGGGCGCCGGCAGCCATGAA 1289
BSNT_05148___ 1290 GCCTTTTACAGAGGACGAAAAAATTTCGAAAGGGCCCGGCCCGCTTAAAA 1339
|||.||||.|||.||||..||.|||.||||.||.||.||.||| ||||||
BL03457___yvf 1290 GCCGTTTAAAGAAGACGGCAAGATTACGAAGGGACCGGGTCCG-TTAAAA 1338
BSNT_05148___ 1340 -ATTGGACCCAGATCCGCGACTTTCCGGCACCGCATAAATCGAGATTCAG 1388
|.|||||||||||.||||||||.||.||.|||.|.||.||.||.|||.|
BL03457___yvf 1339 CAGTGGACCCAGATACGCGACTTCCCCGCGCCGAACAAGTCAAGGTTCCG 1388
BSNT_05148___ 1389 AGACTGGTTTGCGGACAGA--GAAACAAGTGAACGCACGAAGGAGGAGCA 1436
.||||||||||.||||||| ||||.| |||||.||| |
BL03457___yvf 1389 CGACTGGTTTGAGGACAGACGGAAAGA-----------GAAGGGGGA--A 1425
BSNT_05148___ 1437 G-----TGA 1440
| |||
BL03457___yvf 1426 GACAAATGA 1434
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