Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05134 and BL03464
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:15
# Commandline: needle
# -asequence dna-align/BSNT_05134___gapA.1.5803.seq
# -bsequence dna-align/BL03464___gapA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05134___gapA-BL03464___gapA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05134___gapA-BL03464___gapA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05134___gapA
# 2: BL03464___gapA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1008
# Identity: 907/1008 (90.0%)
# Similarity: 907/1008 (90.0%)
# Gaps: 0/1008 ( 0.0%)
# Score: 4131.0
#
#
#=======================================
BSNT_05134___ 1 ATGGCAGTAAAAGTCGGTATTAACGGTTTTGGTCGTATTGGACGTAACGT 50
|||||||||||||||||||||||.||||||||||||||||||||.||.||
BL03464___gap 1 ATGGCAGTAAAAGTCGGTATTAATGGTTTTGGTCGTATTGGACGCAATGT 50
BSNT_05134___ 51 ATTCCGCGCAGCATTAAACAATCCTGAAGTTGAGGTAGTAGCGGTTAACG 100
||||||||||||||||||.|||||||||||||||||.||.||.|||||||
BL03464___gap 51 ATTCCGCGCAGCATTAAATAATCCTGAAGTTGAGGTTGTGGCAGTTAACG 100
BSNT_05134___ 101 ATTTAACAGATGCTAACATGCTGGCTCACCTTTTACAATATGATTCTGTA 150
||||.|||||.|||||||||||.||||||||.||||||||||||||.|||
BL03464___gap 101 ATTTGACAGACGCTAACATGCTTGCTCACCTATTACAATATGATTCAGTA 150
BSNT_05134___ 151 CACGGAAAATTAGACGCTGAAGTTTCAGTTGACGGTAACAACCTTGTTGT 200
||.||||||||.|||||.||.|||||.||||||||.|.||||||||||||
BL03464___gap 151 CATGGAAAATTGGACGCAGAGGTTTCTGTTGACGGAAGCAACCTTGTTGT 200
BSNT_05134___ 201 TAACGGCAAAACAATTGAAGTTTCTGCAGAACGCGATCCTGCTAAACTTA 250
||||||..|||||||..|||||.|.|||||.|||||||||.|||||||.|
BL03464___gap 201 TAACGGTCAAACAATCCAAGTTACAGCAGAGCGCGATCCTTCTAAACTAA 250
BSNT_05134___ 251 GCTGGGGCAAACAAGGCGTTGAAATCGTAGTTGAATCTACTGGTTTCTTC 300
|||||||..|.|||||.|||||||||||.||||||||.||||||||||||
BL03464___gap 251 GCTGGGGAGAGCAAGGTGTTGAAATCGTTGTTGAATCAACTGGTTTCTTC 300
BSNT_05134___ 301 ACAAAACGCGCAGACGCTGCGAAACACTTAGAAGCTGGCGCGAAAAAAGT 350
||||||||||||||.||.||||||||.||.|||||.||||||||||||||
BL03464___gap 301 ACAAAACGCGCAGATGCGGCGAAACATTTGGAAGCCGGCGCGAAAAAAGT 350
BSNT_05134___ 351 AATCATCTCTGCTCCTGCTAACGAAGAAGATATCACAATCGTTATGGGTG 400
.||||||||.||||||||.|..|||||||||||.||||||||||||||||
BL03464___gap 351 TATCATCTCAGCTCCTGCGAGTGAAGAAGATATTACAATCGTTATGGGTG 400
BSNT_05134___ 401 TTAACGAAGATAAATACGATGCGGCTAACCACGATGTTATCTCTAACGCA 450
||||||||||||||||||||||||||||||||.|||||||||||||||||
BL03464___gap 401 TTAACGAAGATAAATACGATGCGGCTAACCACCATGTTATCTCTAACGCA 450
BSNT_05134___ 451 TCTTGCACAACAAACTGCCTTGCGCCGTTTGCAAAAGTACTTAACGATAA 500
||||||||||||||||||||||||||||||||||||||.||.|||||.||
BL03464___gap 451 TCTTGCACAACAAACTGCCTTGCGCCGTTTGCAAAAGTTCTGAACGACAA 500
BSNT_05134___ 501 ATTCGGCATCAAACGCGGTATGATGACAACTGTTCACTCTTACACAAACG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BL03464___gap 501 ATTCGGCATCAAACGCGGTATGATGACAACTGTTCACTCTTACACAAACG 550
BSNT_05134___ 551 ATCAGCAAATCCTTGATCTTCCGCACAAAGACTACCGTCGTGCGCGTGCA 600
|||||||||||||.|||||||||||||||||||||||||||||||||||.
BL03464___gap 551 ATCAGCAAATCCTGGATCTTCCGCACAAAGACTACCGTCGTGCGCGTGCG 600
BSNT_05134___ 601 GCAGCTGAAAACATCATCCCTACATCAACTGGTGCTGCTAAAGCAGTTTC 650
||||||||.|.||||||.||||||.|||||||||||||.|||||.|||||
BL03464___gap 601 GCAGCTGAGAGCATCATTCCTACAACAACTGGTGCTGCGAAAGCCGTTTC 650
BSNT_05134___ 651 TCTAGTTCTTCCTGAACTAAAAGGCAAACTGAACGGTGGAGCAATGCGTG 700
.||.||.|||||||||||.|||||.|||||||||||.|||||||||||||
BL03464___gap 651 CCTTGTACTTCCTGAACTGAAAGGAAAACTGAACGGCGGAGCAATGCGTG 700
BSNT_05134___ 701 TTCCAACTCCAAACGTTTCTCTAGTTGACTTGGTTGCTGAACTGAACCAA 750
|||||||.||||||||.||.||.||||||.|||||||||||||..||.||
BL03464___gap 701 TTCCAACACCAAACGTATCACTTGTTGACCTGGTTGCTGAACTTGACAAA 750
BSNT_05134___ 751 GAAGTAACAGCTGAAGAAGTAAACGCAGCTCTTAAAGAAGCGGCTGAAGG 800
|||||||||||.|||||||||||||||||.|||||||||||.||.|||||
BL03464___gap 751 GAAGTAACAGCAGAAGAAGTAAACGCAGCGCTTAAAGAAGCAGCAGAAGG 800
BSNT_05134___ 801 CGACCTTAAAGGAATCCTTGGCTACAGCGAAGAGCCATTAGTTTCTGGCG 850
|||.|||.||||..|.||||||||||||||||||||..|.||.|||...|
BL03464___gap 801 CGAACTTCAAGGCGTTCTTGGCTACAGCGAAGAGCCGCTTGTATCTAAAG 850
BSNT_05134___ 851 ACTACAACGGAAACAAAAACTCTTCTACAATCGATGCTCTTTCTACAATG 900
||||||||||.||.|.||||||||||||||||||||||||||||||||||
BL03464___gap 851 ACTACAACGGCAATACAAACTCTTCTACAATCGATGCTCTTTCTACAATG 900
BSNT_05134___ 901 GTTATGGAAGGCAGCATGGTAAAAGTAATCTCTTGGTACGATAACGAAAG 950
||||||||||||||||||||.|||||.||.||||||||.||.||||||||
BL03464___gap 901 GTTATGGAAGGCAGCATGGTTAAAGTTATTTCTTGGTATGACAACGAAAG 950
BSNT_05134___ 951 CGGCTACTCTAACCGCGTTGTTGACCTTGCAGCTTACATCGCAAAAAAAG 1000
|||.||.|||.||||.||||||||||||||.|||||||||||||||.|||
BL03464___gap 951 CGGATATTCTCACCGTGTTGTTGACCTTGCCGCTTACATCGCAAAACAAG 1000
BSNT_05134___ 1001 GTCTTTAA 1008
||||||||
BL03464___gap 1001 GTCTTTAA 1008
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