Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05132 and BL03466
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:14
# Commandline: needle
# -asequence dna-align/BSNT_05132___tpiA.1.5803.seq
# -bsequence dna-align/BL03466___tpiA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05132___tpiA-BL03466___tpiA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05132___tpiA-BL03466___tpiA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05132___tpiA
# 2: BL03466___tpiA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 766
# Identity: 640/766 (83.6%)
# Similarity: 640/766 (83.6%)
# Gaps: 8/766 ( 1.0%)
# Score: 2667.0
#
#
#=======================================
BSNT_05132___ 1 ATGAGAAAACCAATTATCGCCGGTAACTGGAAAATGAACAAAACACTCGG 50
|||||||||||||||||.||||||||||||||.|||||.|||...||...
BL03466___tpi 1 ATGAGAAAACCAATTATAGCCGGTAACTGGAAGATGAATAAAGTGCTTTC 50
BSNT_05132___ 51 CGAAGCTGTCAGCTTCGTTGAAGAAGTGAAATCTTCCATTCCAGCAGCAG 100
.|||||||||||||||||||||||||||||||||||||||||.|||||||
BL03466___tpi 51 AGAAGCTGTCAGCTTCGTTGAAGAAGTGAAATCTTCCATTCCCGCAGCAG 100
BSNT_05132___ 101 ACAAAGCTGAAGCTGTTGTTTGCGCGCCAGCGCTTTTCTTAGAAAAGCTT 150
|.|||||.|||||||||||.||.|||||.||.||.|||.|.||||||||.
BL03466___tpi 101 ATAAAGCAGAAGCTGTTGTCTGTGCGCCTGCACTGTTCCTTGAAAAGCTC 150
BSNT_05132___ 151 GCTTCTGCTGTGAAAGGCACTGACCTAAAAGTCGGCGCTCAAAACATGCA 200
.|.||.|||||.||||||||.||.||.|||||||||||.|||||||||||
BL03466___tpi 151 ACATCAGCTGTAAAAGGCACAGATCTGAAAGTCGGCGCGCAAAACATGCA 200
BSNT_05132___ 201 CTTCGAAGAAAGCGGCGCGTTCACAGGCGAAATCAGCCCGGTTGCTCTGA 250
.||.|||||||||||.||.|||||.||.|||||||||||.|..|||.|||
BL03466___tpi 201 TTTTGAAGAAAGCGGAGCTTTCACGGGTGAAATCAGCCCTGCGGCTTTGA 250
BSNT_05132___ 251 AAGACCTTGGCGTTGACTACTGCGTCATCGGCCACTCTGAGCGCCGTGAA 300
||||||||||.|||||.||||||||||||||||||||.||||||||.|||
BL03466___tpi 251 AAGACCTTGGAGTTGAATACTGCGTCATCGGCCACTCCGAGCGCCGCGAA 300
BSNT_05132___ 301 ATGTTCGCTGAAACTGATGAAACAGTTAACAAAAAAGCACATGCAGCTTT 350
|||||.||||||||.||||||||.||.|||||||||||.|||||.||.||
BL03466___tpi 301 ATGTTTGCTGAAACGGATGAAACGGTCAACAAAAAAGCGCATGCTGCATT 350
BSNT_05132___ 351 CAAACACGGCATTGTGCCGATCATCTGTGTAGGTGAAACGCTTGAAGAGC 400
.|||.|||||||.||.|||||||||||.||||||||||||||||||||||
BL03466___tpi 351 TAAATACGGCATCGTTCCGATCATCTGCGTAGGTGAAACGCTTGAAGAGC 400
BSNT_05132___ 401 GTGAAGCCGGCAAAACAAATGATCTTGTTGCTGACCAAGTGAAAAAAGGC 450
|.|||||...|||||||||.||.||||||||.||||||||||||||||..
BL03466___tpi 401 GCGAAGCAAACAAAACAAACGAGCTTGTTGCAGACCAAGTGAAAAAAGCA 450
BSNT_05132___ 451 CTTGCTGGTCTTTCTGAA--GAACAAGTTGCTGCTTCTGTTATTGCGTAT 498
|||||.|| |||...|| |||||.||.||||||||.||.||.||.|||
BL03466___tpi 451 CTTGCAGG--TTTAACAACTGAACAGGTAGCTGCTTCCGTGATCGCTTAT 498
BSNT_05132___ 499 GAGCCAATCTGGGCAATCGGAACAGGCAAATCTTCTACAGCGAAAGATGC 548
|||||.||||||||.||.|||||.|||||.|||||.||.||..|||||||
BL03466___tpi 499 GAGCCGATCTGGGCGATTGGAACCGGCAAGTCTTCAACTGCACAAGATGC 548
BSNT_05132___ 549 GAATGACGTGTGTGCGCATATCCGTAAAACCGTCGC-TGAAAGCTTCAGC 597
.||.||.||.||.|||||.|||||.||||||||.|| |.|.|| |||.|.
BL03466___tpi 549 AAACGAAGTATGCGCGCACATCCGCAAAACCGTGGCATCAGAG-TTCGGA 597
BSNT_05132___ 598 CAAGAAGCTGCAGACAAGC-TTCGCATCCAATATGGCGGAAGCGTAAAGC 646
|||...||.|||||| ||| |.|||||.||.||.||||||||||||||.|
BL03466___tpi 598 CAAACTGCAGCAGAC-AGCGTCCGCATTCAGTACGGCGGAAGCGTAAAAC 646
BSNT_05132___ 647 CTGCAAACATTAAAGAATATATGGCAGAGTCCGATATTGACGGTGCTTTG 696
||||.||||||||||||||||||||.||.||||||||.|||||.|||.|.
BL03466___tpi 647 CTGCGAACATTAAAGAATATATGGCCGAATCCGATATCGACGGCGCTCTT 696
BSNT_05132___ 697 GTCGGCGGCGCGAGCCTTGAGCCACAGTCATTCGTTCAATTATTGGAGGA 746
||.|||||.||.|||||||||||.|||||.|||||.|||||||||||||.
BL03466___tpi 697 GTTGGCGGAGCAAGCCTTGAGCCGCAGTCTTTCGTGCAATTATTGGAGGC 746
BSNT_05132___ 747 AGGTCAATATGAGTAA 762
||||||||||||||||
BL03466___tpi 747 AGGTCAATATGAGTAA 762
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